Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6720 | 20383;20384;20385 | chr2:178727207;178727206;178727205 | chr2:179591934;179591933;179591932 |
N2AB | 6403 | 19432;19433;19434 | chr2:178727207;178727206;178727205 | chr2:179591934;179591933;179591932 |
N2A | 5476 | 16651;16652;16653 | chr2:178727207;178727206;178727205 | chr2:179591934;179591933;179591932 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/V | rs1181953856 | 0.333 | 0.991 | N | 0.572 | 0.449 | 0.440077040801 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
D/V | rs1181953856 | 0.333 | 0.991 | N | 0.572 | 0.449 | 0.440077040801 | gnomAD-4.0.0 | 1.59247E-06 | None | None | None | None | I | None | 0 | 2.28854E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.4016 | ambiguous | 0.418 | ambiguous | -0.016 | Destabilizing | 0.939 | D | 0.415 | neutral | N | 0.458187329 | None | None | I |
D/C | 0.8975 | likely_pathogenic | 0.9042 | pathogenic | -0.279 | Destabilizing | 0.999 | D | 0.646 | neutral | None | None | None | None | I |
D/E | 0.2717 | likely_benign | 0.2485 | benign | -0.389 | Destabilizing | 0.046 | N | 0.287 | neutral | N | 0.482066924 | None | None | I |
D/F | 0.9011 | likely_pathogenic | 0.9151 | pathogenic | 0.015 | Stabilizing | 0.999 | D | 0.577 | neutral | None | None | None | None | I |
D/G | 0.2367 | likely_benign | 0.2542 | benign | -0.138 | Destabilizing | 0.939 | D | 0.513 | neutral | N | 0.448431566 | None | None | I |
D/H | 0.5002 | ambiguous | 0.5291 | ambiguous | 0.675 | Stabilizing | 0.998 | D | 0.529 | neutral | N | 0.492029209 | None | None | I |
D/I | 0.8786 | likely_pathogenic | 0.8829 | pathogenic | 0.245 | Stabilizing | 0.998 | D | 0.591 | neutral | None | None | None | None | I |
D/K | 0.6546 | likely_pathogenic | 0.6879 | pathogenic | 0.441 | Stabilizing | 0.91 | D | 0.477 | neutral | None | None | None | None | I |
D/L | 0.7964 | likely_pathogenic | 0.8177 | pathogenic | 0.245 | Stabilizing | 0.993 | D | 0.571 | neutral | None | None | None | None | I |
D/M | 0.9268 | likely_pathogenic | 0.9299 | pathogenic | -0.016 | Destabilizing | 0.999 | D | 0.6 | neutral | None | None | None | None | I |
D/N | 0.13 | likely_benign | 0.1383 | benign | -0.017 | Destabilizing | 0.322 | N | 0.29 | neutral | N | 0.455208396 | None | None | I |
D/P | 0.8839 | likely_pathogenic | 0.8606 | pathogenic | 0.177 | Stabilizing | 0.993 | D | 0.509 | neutral | None | None | None | None | I |
D/Q | 0.5562 | ambiguous | 0.5638 | ambiguous | 0.015 | Stabilizing | 0.973 | D | 0.535 | neutral | None | None | None | None | I |
D/R | 0.6509 | likely_pathogenic | 0.6829 | pathogenic | 0.717 | Stabilizing | 0.986 | D | 0.513 | neutral | None | None | None | None | I |
D/S | 0.2094 | likely_benign | 0.2244 | benign | -0.05 | Destabilizing | 0.953 | D | 0.469 | neutral | None | None | None | None | I |
D/T | 0.6196 | likely_pathogenic | 0.6263 | pathogenic | 0.063 | Stabilizing | 0.986 | D | 0.467 | neutral | None | None | None | None | I |
D/V | 0.7329 | likely_pathogenic | 0.7412 | pathogenic | 0.177 | Stabilizing | 0.991 | D | 0.572 | neutral | N | 0.481179883 | None | None | I |
D/W | 0.9724 | likely_pathogenic | 0.9743 | pathogenic | 0.088 | Stabilizing | 0.999 | D | 0.664 | neutral | None | None | None | None | I |
D/Y | 0.5108 | ambiguous | 0.5547 | ambiguous | 0.243 | Stabilizing | 0.999 | D | 0.575 | neutral | N | 0.471963171 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.