Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6721 | 20386;20387;20388 | chr2:178727204;178727203;178727202 | chr2:179591931;179591930;179591929 |
N2AB | 6404 | 19435;19436;19437 | chr2:178727204;178727203;178727202 | chr2:179591931;179591930;179591929 |
N2A | 5477 | 16654;16655;16656 | chr2:178727204;178727203;178727202 | chr2:179591931;179591930;179591929 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | None | None | 0.027 | N | 0.43 | 0.377 | 0.6450407448 | gnomAD-4.0.0 | 6.84445E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.9973E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0997 | likely_benign | 0.0902 | benign | -0.443 | Destabilizing | 0.068 | N | 0.405 | neutral | N | 0.49043927 | None | None | N |
S/C | 0.2628 | likely_benign | 0.2387 | benign | -0.305 | Destabilizing | 0.996 | D | 0.459 | neutral | None | None | None | None | N |
S/D | 0.4976 | ambiguous | 0.4985 | ambiguous | 0.323 | Stabilizing | 0.613 | D | 0.434 | neutral | None | None | None | None | N |
S/E | 0.672 | likely_pathogenic | 0.6618 | pathogenic | 0.357 | Stabilizing | 0.816 | D | 0.432 | neutral | None | None | None | None | N |
S/F | 0.3274 | likely_benign | 0.3113 | benign | -0.64 | Destabilizing | 0.079 | N | 0.437 | neutral | None | None | None | None | N |
S/G | 0.1048 | likely_benign | 0.1117 | benign | -0.71 | Destabilizing | 0.855 | D | 0.368 | neutral | None | None | None | None | N |
S/H | 0.4604 | ambiguous | 0.4737 | ambiguous | -1.079 | Destabilizing | 0.988 | D | 0.46 | neutral | None | None | None | None | N |
S/I | 0.5102 | ambiguous | 0.4899 | ambiguous | 0.159 | Stabilizing | 0.856 | D | 0.524 | neutral | None | None | None | None | N |
S/K | 0.7701 | likely_pathogenic | 0.7866 | pathogenic | -0.247 | Destabilizing | 0.922 | D | 0.436 | neutral | None | None | None | None | N |
S/L | 0.1472 | likely_benign | 0.1416 | benign | 0.159 | Stabilizing | 0.027 | N | 0.43 | neutral | N | 0.504837449 | None | None | N |
S/M | 0.2747 | likely_benign | 0.2644 | benign | 0.073 | Stabilizing | 0.977 | D | 0.465 | neutral | None | None | None | None | N |
S/N | 0.2127 | likely_benign | 0.2127 | benign | -0.342 | Destabilizing | 0.005 | N | 0.24 | neutral | None | None | None | None | N |
S/P | 0.6462 | likely_pathogenic | 0.6647 | pathogenic | -0.006 | Destabilizing | 0.981 | D | 0.491 | neutral | N | 0.50871179 | None | None | N |
S/Q | 0.6133 | likely_pathogenic | 0.6034 | pathogenic | -0.332 | Destabilizing | 0.988 | D | 0.497 | neutral | None | None | None | None | N |
S/R | 0.7167 | likely_pathogenic | 0.7347 | pathogenic | -0.297 | Destabilizing | 0.988 | D | 0.491 | neutral | None | None | None | None | N |
S/T | 0.1148 | likely_benign | 0.1145 | benign | -0.328 | Destabilizing | 0.004 | N | 0.235 | neutral | D | 0.522938551 | None | None | N |
S/V | 0.4102 | ambiguous | 0.3815 | ambiguous | -0.006 | Destabilizing | 0.689 | D | 0.515 | neutral | None | None | None | None | N |
S/W | 0.4983 | ambiguous | 0.4926 | ambiguous | -0.713 | Destabilizing | 0.999 | D | 0.6 | neutral | None | None | None | None | N |
S/Y | 0.2516 | likely_benign | 0.2509 | benign | -0.359 | Destabilizing | 0.954 | D | 0.571 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.