Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6733 | 20422;20423;20424 | chr2:178727168;178727167;178727166 | chr2:179591895;179591894;179591893 |
N2AB | 6416 | 19471;19472;19473 | chr2:178727168;178727167;178727166 | chr2:179591895;179591894;179591893 |
N2A | 5489 | 16690;16691;16692 | chr2:178727168;178727167;178727166 | chr2:179591895;179591894;179591893 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs374881285 | 0.176 | 0.001 | N | 0.195 | 0.14 | 0.12205267543 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1359 | likely_benign | 0.1495 | benign | -0.26 | Destabilizing | 0.876 | D | 0.514 | neutral | N | 0.460860356 | None | None | N |
E/C | 0.8936 | likely_pathogenic | 0.9073 | pathogenic | 0.214 | Stabilizing | 0.999 | D | 0.709 | prob.delet. | None | None | None | None | N |
E/D | 0.0992 | likely_benign | 0.0943 | benign | -0.097 | Destabilizing | 0.001 | N | 0.195 | neutral | N | 0.461163071 | None | None | N |
E/F | 0.7676 | likely_pathogenic | 0.8062 | pathogenic | -0.337 | Destabilizing | 0.999 | D | 0.671 | neutral | None | None | None | None | N |
E/G | 0.1341 | likely_benign | 0.1547 | benign | -0.387 | Destabilizing | 0.959 | D | 0.473 | neutral | N | 0.473217392 | None | None | N |
E/H | 0.4507 | ambiguous | 0.5134 | ambiguous | -0.092 | Destabilizing | 0.999 | D | 0.558 | neutral | None | None | None | None | N |
E/I | 0.4424 | ambiguous | 0.4893 | ambiguous | 0.024 | Stabilizing | 0.983 | D | 0.692 | prob.neutral | None | None | None | None | N |
E/K | 0.1256 | likely_benign | 0.1597 | benign | 0.619 | Stabilizing | 0.929 | D | 0.49 | neutral | N | 0.471406967 | None | None | N |
E/L | 0.4429 | ambiguous | 0.4834 | ambiguous | 0.024 | Stabilizing | 0.983 | D | 0.669 | neutral | None | None | None | None | N |
E/M | 0.4959 | ambiguous | 0.5408 | ambiguous | 0.187 | Stabilizing | 0.992 | D | 0.619 | neutral | None | None | None | None | N |
E/N | 0.2289 | likely_benign | 0.2549 | benign | 0.376 | Stabilizing | 0.869 | D | 0.542 | neutral | None | None | None | None | N |
E/P | 0.7555 | likely_pathogenic | 0.8006 | pathogenic | -0.053 | Destabilizing | 0.896 | D | 0.59 | neutral | None | None | None | None | N |
E/Q | 0.1506 | likely_benign | 0.1707 | benign | 0.395 | Stabilizing | 0.985 | D | 0.54 | neutral | N | 0.470432689 | None | None | N |
E/R | 0.2235 | likely_benign | 0.2872 | benign | 0.629 | Stabilizing | 0.992 | D | 0.573 | neutral | None | None | None | None | N |
E/S | 0.1688 | likely_benign | 0.1886 | benign | 0.252 | Stabilizing | 0.904 | D | 0.489 | neutral | None | None | None | None | N |
E/T | 0.213 | likely_benign | 0.2381 | benign | 0.368 | Stabilizing | 0.989 | D | 0.54 | neutral | None | None | None | None | N |
E/V | 0.2632 | likely_benign | 0.2921 | benign | -0.053 | Destabilizing | 0.969 | D | 0.605 | neutral | N | 0.488323134 | None | None | N |
E/W | 0.8647 | likely_pathogenic | 0.8978 | pathogenic | -0.262 | Destabilizing | 1.0 | D | 0.712 | prob.delet. | None | None | None | None | N |
E/Y | 0.6407 | likely_pathogenic | 0.6859 | pathogenic | -0.112 | Destabilizing | 1.0 | D | 0.623 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.