Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6743 | 20452;20453;20454 | chr2:178727138;178727137;178727136 | chr2:179591865;179591864;179591863 |
N2AB | 6426 | 19501;19502;19503 | chr2:178727138;178727137;178727136 | chr2:179591865;179591864;179591863 |
N2A | 5499 | 16720;16721;16722 | chr2:178727138;178727137;178727136 | chr2:179591865;179591864;179591863 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/H | rs1354673910 | -0.683 | None | N | 0.115 | 0.131 | 0.154104182512 | gnomAD-2.1.1 | 4.08E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.01E-06 | 0 |
Q/H | rs1354673910 | -0.683 | None | N | 0.115 | 0.131 | 0.154104182512 | gnomAD-4.0.0 | 5.51483E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.24158E-06 | 0 | 0 |
Q/R | rs794729620 | None | 0.001 | N | 0.12 | 0.08 | 0.119812018005 | gnomAD-4.0.0 | 1.37835E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.81002E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.261 | likely_benign | 0.2478 | benign | -0.493 | Destabilizing | 0.002 | N | 0.155 | neutral | None | None | None | None | I |
Q/C | 0.4531 | ambiguous | 0.4416 | ambiguous | -0.169 | Destabilizing | 0.859 | D | 0.467 | neutral | None | None | None | None | I |
Q/D | 0.4118 | ambiguous | 0.404 | ambiguous | -1.321 | Destabilizing | 0.104 | N | 0.267 | neutral | None | None | None | None | I |
Q/E | 0.0917 | likely_benign | 0.0938 | benign | -1.22 | Destabilizing | 0.042 | N | 0.241 | neutral | N | 0.463850175 | None | None | I |
Q/F | 0.4767 | ambiguous | 0.4727 | ambiguous | -0.281 | Destabilizing | 0.497 | N | 0.511 | neutral | None | None | None | None | I |
Q/G | 0.296 | likely_benign | 0.2847 | benign | -0.843 | Destabilizing | 0.055 | N | 0.411 | neutral | None | None | None | None | I |
Q/H | 0.1128 | likely_benign | 0.113 | benign | -0.889 | Destabilizing | None | N | 0.115 | neutral | N | 0.450211661 | None | None | I |
Q/I | 0.3164 | likely_benign | 0.3009 | benign | 0.396 | Stabilizing | 0.124 | N | 0.5 | neutral | None | None | None | None | I |
Q/K | 0.0846 | likely_benign | 0.0872 | benign | -0.43 | Destabilizing | 0.042 | N | 0.289 | neutral | N | 0.470141429 | None | None | I |
Q/L | 0.1315 | likely_benign | 0.1265 | benign | 0.396 | Stabilizing | 0.042 | N | 0.401 | neutral | N | 0.501792488 | None | None | I |
Q/M | 0.3642 | ambiguous | 0.3534 | ambiguous | 0.802 | Stabilizing | 0.667 | D | 0.399 | neutral | None | None | None | None | I |
Q/N | 0.2613 | likely_benign | 0.2535 | benign | -1.011 | Destabilizing | 0.055 | N | 0.263 | neutral | None | None | None | None | I |
Q/P | 0.7441 | likely_pathogenic | 0.7414 | pathogenic | 0.131 | Stabilizing | 0.301 | N | 0.45 | neutral | N | 0.492151244 | None | None | I |
Q/R | 0.0715 | likely_benign | 0.0729 | benign | -0.379 | Destabilizing | 0.001 | N | 0.12 | neutral | N | 0.455540123 | None | None | I |
Q/S | 0.2381 | likely_benign | 0.2282 | benign | -1.03 | Destabilizing | 0.002 | N | 0.107 | neutral | None | None | None | None | I |
Q/T | 0.1868 | likely_benign | 0.1835 | benign | -0.754 | Destabilizing | 0.055 | N | 0.382 | neutral | None | None | None | None | I |
Q/V | 0.2156 | likely_benign | 0.2114 | benign | 0.131 | Stabilizing | 0.004 | N | 0.253 | neutral | None | None | None | None | I |
Q/W | 0.3129 | likely_benign | 0.3229 | benign | -0.253 | Destabilizing | 0.958 | D | 0.465 | neutral | None | None | None | None | I |
Q/Y | 0.275 | likely_benign | 0.2702 | benign | 0.051 | Stabilizing | 0.124 | N | 0.492 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.