Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6745 | 20458;20459;20460 | chr2:178727132;178727131;178727130 | chr2:179591859;179591858;179591857 |
N2AB | 6428 | 19507;19508;19509 | chr2:178727132;178727131;178727130 | chr2:179591859;179591858;179591857 |
N2A | 5501 | 16726;16727;16728 | chr2:178727132;178727131;178727130 | chr2:179591859;179591858;179591857 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs756864644 | -0.098 | 0.801 | N | 0.351 | 0.199 | 0.264547087235 | gnomAD-2.1.1 | 2.87E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 2.36423E-04 | None | 0 | 0 | 0 |
P/S | rs756864644 | -0.098 | 0.801 | N | 0.351 | 0.199 | 0.264547087235 | gnomAD-4.0.0 | 1.45056E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.06541E-07 | 2.38983E-04 | 0 |
P/T | None | None | 0.891 | N | 0.362 | 0.205 | 0.465975295344 | gnomAD-4.0.0 | 6.90741E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.06541E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0752 | likely_benign | 0.083 | benign | -0.375 | Destabilizing | 0.801 | D | 0.355 | neutral | N | 0.407170173 | None | None | I |
P/C | 0.5712 | likely_pathogenic | 0.6395 | pathogenic | -0.709 | Destabilizing | 0.998 | D | 0.494 | neutral | None | None | None | None | I |
P/D | 0.2489 | likely_benign | 0.2746 | benign | -0.431 | Destabilizing | 0.007 | N | 0.194 | neutral | None | None | None | None | I |
P/E | 0.184 | likely_benign | 0.206 | benign | -0.556 | Destabilizing | 0.029 | N | 0.199 | neutral | None | None | None | None | I |
P/F | 0.3775 | ambiguous | 0.4372 | ambiguous | -0.726 | Destabilizing | 0.991 | D | 0.427 | neutral | None | None | None | None | I |
P/G | 0.2816 | likely_benign | 0.3206 | benign | -0.456 | Destabilizing | 0.842 | D | 0.392 | neutral | None | None | None | None | I |
P/H | 0.1591 | likely_benign | 0.1842 | benign | -0.045 | Destabilizing | 0.989 | D | 0.425 | neutral | N | 0.497272102 | None | None | I |
P/I | 0.2229 | likely_benign | 0.2561 | benign | -0.313 | Destabilizing | 0.974 | D | 0.425 | neutral | None | None | None | None | I |
P/K | 0.2307 | likely_benign | 0.2781 | benign | -0.43 | Destabilizing | 0.842 | D | 0.341 | neutral | None | None | None | None | I |
P/L | 0.1013 | likely_benign | 0.1117 | benign | -0.313 | Destabilizing | 0.966 | D | 0.392 | neutral | N | 0.478166267 | None | None | I |
P/M | 0.2554 | likely_benign | 0.2885 | benign | -0.464 | Destabilizing | 0.998 | D | 0.44 | neutral | None | None | None | None | I |
P/N | 0.2319 | likely_benign | 0.2677 | benign | -0.21 | Destabilizing | 0.728 | D | 0.38 | neutral | None | None | None | None | I |
P/Q | 0.1432 | likely_benign | 0.162 | benign | -0.457 | Destabilizing | 0.949 | D | 0.343 | neutral | None | None | None | None | I |
P/R | 0.1541 | likely_benign | 0.1787 | benign | 0.086 | Stabilizing | 0.934 | D | 0.41 | neutral | N | 0.466871838 | None | None | I |
P/S | 0.1064 | likely_benign | 0.1205 | benign | -0.504 | Destabilizing | 0.801 | D | 0.351 | neutral | N | 0.445973703 | None | None | I |
P/T | 0.0869 | likely_benign | 0.0963 | benign | -0.536 | Destabilizing | 0.891 | D | 0.362 | neutral | N | 0.47539532 | None | None | I |
P/V | 0.1678 | likely_benign | 0.19 | benign | -0.302 | Destabilizing | 0.974 | D | 0.395 | neutral | None | None | None | None | I |
P/W | 0.5432 | ambiguous | 0.6217 | pathogenic | -0.794 | Destabilizing | 0.998 | D | 0.571 | neutral | None | None | None | None | I |
P/Y | 0.3474 | ambiguous | 0.4103 | ambiguous | -0.506 | Destabilizing | 0.991 | D | 0.425 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.