Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6749 | 20470;20471;20472 | chr2:178727120;178727119;178727118 | chr2:179591847;179591846;179591845 |
N2AB | 6432 | 19519;19520;19521 | chr2:178727120;178727119;178727118 | chr2:179591847;179591846;179591845 |
N2A | 5505 | 16738;16739;16740 | chr2:178727120;178727119;178727118 | chr2:179591847;179591846;179591845 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/R | rs2079475430 | None | 0.029 | N | 0.529 | 0.181 | 0.31411915649 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 3.16456E-03 | 0 | 0 | 0 |
T/R | rs2079475430 | None | 0.029 | N | 0.529 | 0.181 | 0.31411915649 | gnomAD-4.0.0 | 1.88295E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.67224E-04 | 0 | 0 | 3.25024E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0579 | likely_benign | 0.0618 | benign | -0.996 | Destabilizing | None | N | 0.092 | neutral | N | 0.366918274 | None | None | I |
T/C | 0.4683 | ambiguous | 0.5036 | ambiguous | -0.599 | Destabilizing | 0.356 | N | 0.513 | neutral | None | None | None | None | I |
T/D | 0.2903 | likely_benign | 0.3302 | benign | 0.184 | Stabilizing | None | N | 0.184 | neutral | None | None | None | None | I |
T/E | 0.3026 | likely_benign | 0.3624 | ambiguous | 0.199 | Stabilizing | 0.016 | N | 0.439 | neutral | None | None | None | None | I |
T/F | 0.2627 | likely_benign | 0.2832 | benign | -1.117 | Destabilizing | 0.214 | N | 0.623 | neutral | None | None | None | None | I |
T/G | 0.2385 | likely_benign | 0.2589 | benign | -1.251 | Destabilizing | 0.016 | N | 0.473 | neutral | None | None | None | None | I |
T/H | 0.2806 | likely_benign | 0.3179 | benign | -1.397 | Destabilizing | 0.628 | D | 0.587 | neutral | None | None | None | None | I |
T/I | 0.1474 | likely_benign | 0.1744 | benign | -0.403 | Destabilizing | None | N | 0.217 | neutral | N | 0.464410322 | None | None | I |
T/K | 0.2599 | likely_benign | 0.3187 | benign | -0.528 | Destabilizing | None | N | 0.209 | neutral | N | 0.478915628 | None | None | I |
T/L | 0.1142 | likely_benign | 0.1205 | benign | -0.403 | Destabilizing | 0.002 | N | 0.383 | neutral | None | None | None | None | I |
T/M | 0.1021 | likely_benign | 0.1037 | benign | -0.213 | Destabilizing | 0.214 | N | 0.517 | neutral | None | None | None | None | I |
T/N | 0.1236 | likely_benign | 0.1353 | benign | -0.508 | Destabilizing | 0.072 | N | 0.361 | neutral | None | None | None | None | I |
T/P | 0.5946 | likely_pathogenic | 0.6605 | pathogenic | -0.569 | Destabilizing | 0.106 | N | 0.516 | neutral | D | 0.523842628 | None | None | I |
T/Q | 0.2479 | likely_benign | 0.2889 | benign | -0.62 | Destabilizing | 0.072 | N | 0.564 | neutral | None | None | None | None | I |
T/R | 0.1989 | likely_benign | 0.2419 | benign | -0.337 | Destabilizing | 0.029 | N | 0.529 | neutral | N | 0.490652774 | None | None | I |
T/S | 0.0908 | likely_benign | 0.0955 | benign | -0.891 | Destabilizing | 0.012 | N | 0.353 | neutral | N | 0.455654766 | None | None | I |
T/V | 0.1132 | likely_benign | 0.1267 | benign | -0.569 | Destabilizing | None | N | 0.12 | neutral | None | None | None | None | I |
T/W | 0.7085 | likely_pathogenic | 0.7371 | pathogenic | -1.004 | Destabilizing | 0.864 | D | 0.574 | neutral | None | None | None | None | I |
T/Y | 0.3195 | likely_benign | 0.3498 | ambiguous | -0.766 | Destabilizing | 0.356 | N | 0.615 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.