Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6750 | 20473;20474;20475 | chr2:178727117;178727116;178727115 | chr2:179591844;179591843;179591842 |
N2AB | 6433 | 19522;19523;19524 | chr2:178727117;178727116;178727115 | chr2:179591844;179591843;179591842 |
N2A | 5506 | 16741;16742;16743 | chr2:178727117;178727116;178727115 | chr2:179591844;179591843;179591842 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | rs1560744172 | None | 0.767 | N | 0.5 | 0.311 | 0.361160317528 | gnomAD-2.1.1 | 4.15E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.13E-06 | 0 |
S/N | rs1560744172 | None | 0.767 | N | 0.5 | 0.311 | 0.361160317528 | gnomAD-4.0.0 | 1.65009E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.11857E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.133 | likely_benign | 0.1352 | benign | -0.606 | Destabilizing | 0.358 | N | 0.499 | neutral | None | None | None | None | N |
S/C | 0.2947 | likely_benign | 0.3194 | benign | -0.36 | Destabilizing | 0.091 | N | 0.438 | neutral | D | 0.527514061 | None | None | N |
S/D | 0.6515 | likely_pathogenic | 0.7007 | pathogenic | 0.368 | Stabilizing | 0.974 | D | 0.475 | neutral | None | None | None | None | N |
S/E | 0.7525 | likely_pathogenic | 0.7936 | pathogenic | 0.301 | Stabilizing | 0.962 | D | 0.469 | neutral | None | None | None | None | N |
S/F | 0.3124 | likely_benign | 0.3616 | ambiguous | -1.062 | Destabilizing | 0.999 | D | 0.659 | neutral | None | None | None | None | N |
S/G | 0.1548 | likely_benign | 0.1635 | benign | -0.76 | Destabilizing | 0.981 | D | 0.501 | neutral | D | 0.526753593 | None | None | N |
S/H | 0.4184 | ambiguous | 0.4956 | ambiguous | -1.173 | Destabilizing | 1.0 | D | 0.603 | neutral | None | None | None | None | N |
S/I | 0.2724 | likely_benign | 0.3121 | benign | -0.324 | Destabilizing | 0.995 | D | 0.629 | neutral | N | 0.500509036 | None | None | N |
S/K | 0.8003 | likely_pathogenic | 0.8527 | pathogenic | -0.47 | Destabilizing | 0.972 | D | 0.462 | neutral | None | None | None | None | N |
S/L | 0.2206 | likely_benign | 0.2342 | benign | -0.324 | Destabilizing | 0.986 | D | 0.535 | neutral | None | None | None | None | N |
S/M | 0.3631 | ambiguous | 0.3793 | ambiguous | -0.1 | Destabilizing | 1.0 | D | 0.604 | neutral | None | None | None | None | N |
S/N | 0.2044 | likely_benign | 0.2286 | benign | -0.219 | Destabilizing | 0.767 | D | 0.5 | neutral | N | 0.501558993 | None | None | N |
S/P | 0.9022 | likely_pathogenic | 0.919 | pathogenic | -0.388 | Destabilizing | 0.997 | D | 0.603 | neutral | None | None | None | None | N |
S/Q | 0.6163 | likely_pathogenic | 0.6755 | pathogenic | -0.43 | Destabilizing | 0.998 | D | 0.519 | neutral | None | None | None | None | N |
S/R | 0.6633 | likely_pathogenic | 0.73 | pathogenic | -0.288 | Destabilizing | 0.616 | D | 0.365 | neutral | N | 0.516089936 | None | None | N |
S/T | 0.1176 | likely_benign | 0.1221 | benign | -0.363 | Destabilizing | 0.021 | N | 0.308 | neutral | D | 0.524917277 | None | None | N |
S/V | 0.2913 | likely_benign | 0.3098 | benign | -0.388 | Destabilizing | 0.962 | D | 0.57 | neutral | None | None | None | None | N |
S/W | 0.5442 | ambiguous | 0.6166 | pathogenic | -1.014 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
S/Y | 0.3059 | likely_benign | 0.3488 | ambiguous | -0.755 | Destabilizing | 0.999 | D | 0.659 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.