Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6755 | 20488;20489;20490 | chr2:178727102;178727101;178727100 | chr2:179591829;179591828;179591827 |
N2AB | 6438 | 19537;19538;19539 | chr2:178727102;178727101;178727100 | chr2:179591829;179591828;179591827 |
N2A | 5511 | 16756;16757;16758 | chr2:178727102;178727101;178727100 | chr2:179591829;179591828;179591827 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs2079471482 | None | 0.722 | N | 0.662 | 0.371 | 0.497547018531 | gnomAD-4.0.0 | 1.43747E-06 | None | None | None | None | N | None | 6.36983E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/F | rs876657599 | None | 0.018 | N | 0.563 | 0.233 | 0.482646159919 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/F | rs876657599 | None | 0.018 | N | 0.563 | 0.233 | 0.482646159919 | gnomAD-4.0.0 | 2.71075E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.07908E-06 | 0 | 0 |
V/I | None | -0.473 | 0.008 | N | 0.282 | 0.071 | 0.19670166235 | gnomAD-2.1.1 | 4.29E-06 | None | None | None | None | N | None | 6.7E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/I | None | -0.473 | 0.008 | N | 0.282 | 0.071 | 0.19670166235 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/I | None | -0.473 | 0.008 | N | 0.282 | 0.071 | 0.19670166235 | gnomAD-4.0.0 | 6.57583E-06 | None | None | None | None | N | None | 2.41371E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/L | rs876657599 | None | 0.003 | N | 0.291 | 0.145 | 0.0884992946249 | gnomAD-2.1.1 | 4.29E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.69E-05 | None | 0 | 0 | 0 |
V/L | rs876657599 | None | 0.003 | N | 0.291 | 0.145 | 0.0884992946249 | gnomAD-4.0.0 | 1.70727E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.6429E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6756 | likely_pathogenic | 0.727 | pathogenic | -2.371 | Highly Destabilizing | 0.722 | D | 0.662 | neutral | N | 0.495795553 | None | None | N |
V/C | 0.9203 | likely_pathogenic | 0.9273 | pathogenic | -2.012 | Highly Destabilizing | 0.996 | D | 0.81 | deleterious | None | None | None | None | N |
V/D | 0.9703 | likely_pathogenic | 0.9834 | pathogenic | -2.977 | Highly Destabilizing | 0.983 | D | 0.875 | deleterious | N | 0.496302532 | None | None | N |
V/E | 0.9301 | likely_pathogenic | 0.9511 | pathogenic | -2.729 | Highly Destabilizing | 0.961 | D | 0.856 | deleterious | None | None | None | None | N |
V/F | 0.2389 | likely_benign | 0.2708 | benign | -1.415 | Destabilizing | 0.018 | N | 0.563 | neutral | N | 0.463105762 | None | None | N |
V/G | 0.7891 | likely_pathogenic | 0.8321 | pathogenic | -2.943 | Highly Destabilizing | 0.949 | D | 0.857 | deleterious | N | 0.496302532 | None | None | N |
V/H | 0.9635 | likely_pathogenic | 0.9763 | pathogenic | -2.665 | Highly Destabilizing | 0.996 | D | 0.867 | deleterious | None | None | None | None | N |
V/I | 0.071 | likely_benign | 0.0763 | benign | -0.75 | Destabilizing | 0.008 | N | 0.282 | neutral | N | 0.459347567 | None | None | N |
V/K | 0.9613 | likely_pathogenic | 0.9738 | pathogenic | -1.968 | Destabilizing | 0.961 | D | 0.849 | deleterious | None | None | None | None | N |
V/L | 0.1519 | likely_benign | 0.1765 | benign | -0.75 | Destabilizing | 0.003 | N | 0.291 | neutral | N | 0.36170551 | None | None | N |
V/M | 0.1969 | likely_benign | 0.2158 | benign | -0.89 | Destabilizing | 0.923 | D | 0.71 | prob.delet. | None | None | None | None | N |
V/N | 0.9129 | likely_pathogenic | 0.9457 | pathogenic | -2.385 | Highly Destabilizing | 0.987 | D | 0.857 | deleterious | None | None | None | None | N |
V/P | 0.9806 | likely_pathogenic | 0.9903 | pathogenic | -1.266 | Destabilizing | 0.987 | D | 0.85 | deleterious | None | None | None | None | N |
V/Q | 0.9308 | likely_pathogenic | 0.9528 | pathogenic | -2.175 | Highly Destabilizing | 0.987 | D | 0.846 | deleterious | None | None | None | None | N |
V/R | 0.9428 | likely_pathogenic | 0.9615 | pathogenic | -1.834 | Destabilizing | 0.961 | D | 0.86 | deleterious | None | None | None | None | N |
V/S | 0.8796 | likely_pathogenic | 0.9138 | pathogenic | -3.036 | Highly Destabilizing | 0.961 | D | 0.837 | deleterious | None | None | None | None | N |
V/T | 0.7697 | likely_pathogenic | 0.8126 | pathogenic | -2.635 | Highly Destabilizing | 0.775 | D | 0.695 | prob.neutral | None | None | None | None | N |
V/W | 0.9098 | likely_pathogenic | 0.9363 | pathogenic | -1.933 | Destabilizing | 0.996 | D | 0.865 | deleterious | None | None | None | None | N |
V/Y | 0.7595 | likely_pathogenic | 0.8133 | pathogenic | -1.591 | Destabilizing | 0.858 | D | 0.824 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.