Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6766 | 20521;20522;20523 | chr2:178726026;178726025;178726024 | chr2:179590753;179590752;179590751 |
N2AB | 6449 | 19570;19571;19572 | chr2:178726026;178726025;178726024 | chr2:179590753;179590752;179590751 |
N2A | 5522 | 16789;16790;16791 | chr2:178726026;178726025;178726024 | chr2:179590753;179590752;179590751 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | None | N | 0.097 | 0.083 | 0.154104182512 | gnomAD-4.0.0 | 1.80926E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.2181E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.1148 | likely_benign | 0.1237 | benign | -1.763 | Destabilizing | None | N | 0.135 | neutral | None | None | None | None | N |
F/C | 0.1185 | likely_benign | 0.1177 | benign | -0.557 | Destabilizing | 0.103 | N | 0.363 | neutral | N | 0.477435548 | None | None | N |
F/D | 0.3504 | ambiguous | 0.3366 | benign | -0.117 | Destabilizing | 0.004 | N | 0.387 | neutral | None | None | None | None | N |
F/E | 0.3602 | ambiguous | 0.3593 | ambiguous | -0.075 | Destabilizing | None | N | 0.182 | neutral | None | None | None | None | N |
F/G | 0.3121 | likely_benign | 0.319 | benign | -2.059 | Highly Destabilizing | 0.002 | N | 0.415 | neutral | None | None | None | None | N |
F/H | 0.1829 | likely_benign | 0.1763 | benign | -0.531 | Destabilizing | 0.069 | N | 0.317 | neutral | None | None | None | None | N |
F/I | 0.057 | likely_benign | 0.0661 | benign | -0.91 | Destabilizing | None | N | 0.107 | neutral | N | 0.443205544 | None | None | N |
F/K | 0.1818 | likely_benign | 0.1882 | benign | -0.607 | Destabilizing | None | N | 0.171 | neutral | None | None | None | None | N |
F/L | 0.3191 | likely_benign | 0.3708 | ambiguous | -0.91 | Destabilizing | None | N | 0.097 | neutral | N | 0.422888987 | None | None | N |
F/M | 0.1611 | likely_benign | 0.1751 | benign | -0.58 | Destabilizing | 0.021 | N | 0.275 | neutral | None | None | None | None | N |
F/N | 0.1736 | likely_benign | 0.1704 | benign | -0.488 | Destabilizing | 0.009 | N | 0.436 | neutral | None | None | None | None | N |
F/P | 0.3665 | ambiguous | 0.4121 | ambiguous | -1.183 | Destabilizing | 0.018 | N | 0.47 | neutral | None | None | None | None | N |
F/Q | 0.2273 | likely_benign | 0.2307 | benign | -0.581 | Destabilizing | None | N | 0.206 | neutral | None | None | None | None | N |
F/R | 0.1607 | likely_benign | 0.1728 | benign | -0.043 | Destabilizing | 0.004 | N | 0.386 | neutral | None | None | None | None | N |
F/S | 0.0887 | likely_benign | 0.0923 | benign | -1.272 | Destabilizing | None | N | 0.145 | neutral | N | 0.414096145 | None | None | N |
F/T | 0.0986 | likely_benign | 0.1051 | benign | -1.136 | Destabilizing | None | N | 0.151 | neutral | None | None | None | None | N |
F/V | 0.0586 | likely_benign | 0.0649 | benign | -1.183 | Destabilizing | None | N | 0.127 | neutral | N | 0.410690481 | None | None | N |
F/W | 0.3574 | ambiguous | 0.3419 | ambiguous | -0.431 | Destabilizing | 0.132 | N | 0.287 | neutral | None | None | None | None | N |
F/Y | 0.0961 | likely_benign | 0.0928 | benign | -0.533 | Destabilizing | None | N | 0.102 | neutral | N | 0.469720142 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.