Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6768 | 20527;20528;20529 | chr2:178726020;178726019;178726018 | chr2:179590747;179590746;179590745 |
N2AB | 6451 | 19576;19577;19578 | chr2:178726020;178726019;178726018 | chr2:179590747;179590746;179590745 |
N2A | 5524 | 16795;16796;16797 | chr2:178726020;178726019;178726018 | chr2:179590747;179590746;179590745 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | None | None | 0.001 | N | 0.101 | 0.117 | 0.0806252709748 | gnomAD-4.0.0 | 5.76205E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.51997E-06 | 0 | 1.75003E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0743 | likely_benign | 0.068 | benign | -0.837 | Destabilizing | 0.003 | N | 0.096 | neutral | N | 0.467602556 | None | None | I |
P/C | 0.3703 | ambiguous | 0.3941 | ambiguous | -0.664 | Destabilizing | 0.983 | D | 0.376 | neutral | None | None | None | None | I |
P/D | 0.267 | likely_benign | 0.2358 | benign | -0.602 | Destabilizing | 0.129 | N | 0.319 | neutral | None | None | None | None | I |
P/E | 0.1867 | likely_benign | 0.1643 | benign | -0.645 | Destabilizing | 0.01 | N | 0.173 | neutral | None | None | None | None | I |
P/F | 0.3444 | ambiguous | 0.34 | benign | -0.725 | Destabilizing | 0.836 | D | 0.422 | neutral | None | None | None | None | I |
P/G | 0.2087 | likely_benign | 0.1868 | benign | -1.063 | Destabilizing | 0.129 | N | 0.371 | neutral | None | None | None | None | I |
P/H | 0.1261 | likely_benign | 0.1219 | benign | -0.501 | Destabilizing | 0.004 | N | 0.273 | neutral | N | 0.482841368 | None | None | I |
P/I | 0.2508 | likely_benign | 0.237 | benign | -0.351 | Destabilizing | 0.716 | D | 0.468 | neutral | None | None | None | None | I |
P/K | 0.1638 | likely_benign | 0.1509 | benign | -0.74 | Destabilizing | 0.129 | N | 0.323 | neutral | None | None | None | None | I |
P/L | 0.115 | likely_benign | 0.1135 | benign | -0.351 | Destabilizing | 0.351 | N | 0.418 | neutral | N | 0.484900238 | None | None | I |
P/M | 0.2524 | likely_benign | 0.2398 | benign | -0.443 | Destabilizing | 0.94 | D | 0.383 | neutral | None | None | None | None | I |
P/N | 0.1944 | likely_benign | 0.1721 | benign | -0.534 | Destabilizing | 0.264 | N | 0.415 | neutral | None | None | None | None | I |
P/Q | 0.1064 | likely_benign | 0.0998 | benign | -0.703 | Destabilizing | 0.418 | N | 0.387 | neutral | None | None | None | None | I |
P/R | 0.1196 | likely_benign | 0.115 | benign | -0.229 | Destabilizing | 0.351 | N | 0.439 | neutral | N | 0.419693966 | None | None | I |
P/S | 0.0939 | likely_benign | 0.086 | benign | -0.949 | Destabilizing | 0.001 | N | 0.101 | neutral | N | 0.402281641 | None | None | I |
P/T | 0.0887 | likely_benign | 0.0811 | benign | -0.883 | Destabilizing | 0.007 | N | 0.138 | neutral | N | 0.436626288 | None | None | I |
P/V | 0.1711 | likely_benign | 0.1575 | benign | -0.477 | Destabilizing | 0.418 | N | 0.372 | neutral | None | None | None | None | I |
P/W | 0.5131 | ambiguous | 0.4944 | ambiguous | -0.861 | Destabilizing | 0.983 | D | 0.385 | neutral | None | None | None | None | I |
P/Y | 0.3005 | likely_benign | 0.2944 | benign | -0.565 | Destabilizing | 0.557 | D | 0.448 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.