Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6770 | 20533;20534;20535 | chr2:178726014;178726013;178726012 | chr2:179590741;179590740;179590739 |
N2AB | 6453 | 19582;19583;19584 | chr2:178726014;178726013;178726012 | chr2:179590741;179590740;179590739 |
N2A | 5526 | 16801;16802;16803 | chr2:178726014;178726013;178726012 | chr2:179590741;179590740;179590739 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.007 | N | 0.107 | 0.156 | 0.497613835824 | gnomAD-4.0.0 | 1.74383E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.6619E-05 | 0 |
V/I | None | None | 0.003 | N | 0.162 | 0.136 | 0.421427970867 | gnomAD-4.0.0 | 7.12211E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.25799E-07 | 0 | 0 |
V/L | None | None | 0.001 | N | 0.099 | 0.136 | 0.340510301474 | gnomAD-4.0.0 | 2.84884E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.7032E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1381 | likely_benign | 0.1281 | benign | -1.551 | Destabilizing | 0.007 | N | 0.107 | neutral | N | 0.517074158 | None | None | N |
V/C | 0.7223 | likely_pathogenic | 0.7183 | pathogenic | -1.06 | Destabilizing | 0.998 | D | 0.34 | neutral | None | None | None | None | N |
V/D | 0.4593 | ambiguous | 0.4626 | ambiguous | -1.415 | Destabilizing | 0.992 | D | 0.444 | neutral | None | None | None | None | N |
V/E | 0.301 | likely_benign | 0.2714 | benign | -1.371 | Destabilizing | 0.677 | D | 0.382 | neutral | N | 0.513567771 | None | None | N |
V/F | 0.1507 | likely_benign | 0.1474 | benign | -1.054 | Destabilizing | 0.978 | D | 0.349 | neutral | None | None | None | None | N |
V/G | 0.2482 | likely_benign | 0.2445 | benign | -1.923 | Destabilizing | 0.898 | D | 0.42 | neutral | N | 0.513314281 | None | None | N |
V/H | 0.5044 | ambiguous | 0.4934 | ambiguous | -1.57 | Destabilizing | 0.999 | D | 0.442 | neutral | None | None | None | None | N |
V/I | 0.0747 | likely_benign | 0.0734 | benign | -0.61 | Destabilizing | 0.003 | N | 0.162 | neutral | N | 0.512070983 | None | None | N |
V/K | 0.3026 | likely_benign | 0.2824 | benign | -1.41 | Destabilizing | 0.752 | D | 0.385 | neutral | None | None | None | None | N |
V/L | 0.1662 | likely_benign | 0.1475 | benign | -0.61 | Destabilizing | 0.001 | N | 0.099 | neutral | N | 0.515225932 | None | None | N |
V/M | 0.1267 | likely_benign | 0.11 | benign | -0.503 | Destabilizing | 0.97 | D | 0.368 | neutral | None | None | None | None | N |
V/N | 0.3437 | ambiguous | 0.3417 | ambiguous | -1.232 | Destabilizing | 0.865 | D | 0.456 | neutral | None | None | None | None | N |
V/P | 0.597 | likely_pathogenic | 0.5781 | pathogenic | -0.889 | Destabilizing | 0.865 | D | 0.412 | neutral | None | None | None | None | N |
V/Q | 0.2711 | likely_benign | 0.2519 | benign | -1.318 | Destabilizing | 0.968 | D | 0.411 | neutral | None | None | None | None | N |
V/R | 0.2548 | likely_benign | 0.2545 | benign | -0.994 | Destabilizing | 0.286 | N | 0.353 | neutral | None | None | None | None | N |
V/S | 0.2143 | likely_benign | 0.2059 | benign | -1.781 | Destabilizing | 0.777 | D | 0.382 | neutral | None | None | None | None | N |
V/T | 0.1327 | likely_benign | 0.1256 | benign | -1.622 | Destabilizing | 0.738 | D | 0.303 | neutral | None | None | None | None | N |
V/W | 0.7396 | likely_pathogenic | 0.7283 | pathogenic | -1.332 | Destabilizing | 1.0 | D | 0.511 | neutral | None | None | None | None | N |
V/Y | 0.5152 | ambiguous | 0.4939 | ambiguous | -1.022 | Destabilizing | 0.989 | D | 0.354 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.