Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6775 | 20548;20549;20550 | chr2:178725999;178725998;178725997 | chr2:179590726;179590725;179590724 |
N2AB | 6458 | 19597;19598;19599 | chr2:178725999;178725998;178725997 | chr2:179590726;179590725;179590724 |
N2A | 5531 | 16816;16817;16818 | chr2:178725999;178725998;178725997 | chr2:179590726;179590725;179590724 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | None | None | 0.042 | N | 0.42 | 0.091 | 0.158396225186 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.196 | likely_benign | 0.1773 | benign | -0.255 | Destabilizing | 0.055 | N | 0.48 | neutral | None | None | None | None | N |
N/C | 0.3713 | ambiguous | 0.3319 | benign | 0.384 | Stabilizing | 0.958 | D | 0.588 | neutral | None | None | None | None | N |
N/D | 0.1123 | likely_benign | 0.1169 | benign | 0.049 | Stabilizing | None | N | 0.179 | neutral | N | 0.430431035 | None | None | N |
N/E | 0.2967 | likely_benign | 0.3136 | benign | -0.001 | Destabilizing | 0.055 | N | 0.352 | neutral | None | None | None | None | N |
N/F | 0.4609 | ambiguous | 0.438 | ambiguous | -0.686 | Destabilizing | 0.859 | D | 0.603 | neutral | None | None | None | None | N |
N/G | 0.1264 | likely_benign | 0.1348 | benign | -0.403 | Destabilizing | None | N | 0.163 | neutral | None | None | None | None | N |
N/H | 0.1281 | likely_benign | 0.1173 | benign | -0.448 | Destabilizing | 0.822 | D | 0.446 | neutral | N | 0.507315738 | None | None | N |
N/I | 0.2827 | likely_benign | 0.2568 | benign | 0.044 | Stabilizing | 0.602 | D | 0.592 | neutral | N | 0.491822076 | None | None | N |
N/K | 0.2683 | likely_benign | 0.2764 | benign | 0.128 | Stabilizing | 0.175 | N | 0.345 | neutral | N | 0.469354782 | None | None | N |
N/L | 0.2758 | likely_benign | 0.2481 | benign | 0.044 | Stabilizing | 0.364 | N | 0.587 | neutral | None | None | None | None | N |
N/M | 0.3171 | likely_benign | 0.2827 | benign | 0.38 | Stabilizing | 0.958 | D | 0.569 | neutral | None | None | None | None | N |
N/P | 0.6736 | likely_pathogenic | 0.68 | pathogenic | -0.03 | Destabilizing | 0.667 | D | 0.556 | neutral | None | None | None | None | N |
N/Q | 0.2996 | likely_benign | 0.2792 | benign | -0.281 | Destabilizing | 0.667 | D | 0.4 | neutral | None | None | None | None | N |
N/R | 0.3478 | ambiguous | 0.3645 | ambiguous | 0.213 | Stabilizing | 0.364 | N | 0.402 | neutral | None | None | None | None | N |
N/S | 0.0953 | likely_benign | 0.089 | benign | -0.026 | Destabilizing | 0.042 | N | 0.42 | neutral | N | 0.473664524 | None | None | N |
N/T | 0.1383 | likely_benign | 0.124 | benign | 0.053 | Stabilizing | 0.175 | N | 0.329 | neutral | N | 0.50229392 | None | None | N |
N/V | 0.2762 | likely_benign | 0.2565 | benign | -0.03 | Destabilizing | 0.364 | N | 0.587 | neutral | None | None | None | None | N |
N/W | 0.7147 | likely_pathogenic | 0.7149 | pathogenic | -0.707 | Destabilizing | 0.958 | D | 0.599 | neutral | None | None | None | None | N |
N/Y | 0.1363 | likely_benign | 0.1341 | benign | -0.429 | Destabilizing | 0.822 | D | 0.573 | neutral | N | 0.491822076 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.