Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6781 | 20566;20567;20568 | chr2:178725981;178725980;178725979 | chr2:179590708;179590707;179590706 |
N2AB | 6464 | 19615;19616;19617 | chr2:178725981;178725980;178725979 | chr2:179590708;179590707;179590706 |
N2A | 5537 | 16834;16835;16836 | chr2:178725981;178725980;178725979 | chr2:179590708;179590707;179590706 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.917 | N | 0.55 | 0.413 | 0.555867075214 | gnomAD-4.0.0 | 3.20496E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.75738E-06 | 0 | 0 |
E/K | rs72648958 | -0.258 | 0.953 | D | 0.553 | 0.318 | None | gnomAD-2.1.1 | 9.93871E-04 | None | None | None | None | N | None | 3.33417E-04 | 2.61203E-04 | None | 0 | 0 | None | 9.65894E-04 | None | 4.01994E-04 | 1.66299E-03 | 1.14384E-03 |
E/K | rs72648958 | -0.258 | 0.953 | D | 0.553 | 0.318 | None | gnomAD-3.1.2 | 1.16377E-03 | None | None | None | None | N | None | 4.58738E-04 | 1.96747E-04 | 0 | 0 | 0 | None | 2.82539E-04 | 0 | 2.19098E-03 | 6.20091E-04 | 0 |
E/K | rs72648958 | -0.258 | 0.953 | D | 0.553 | 0.318 | None | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 0 | 0 | None | None | 0 | 1E-03 | None | None | None | 0 | None |
E/K | rs72648958 | -0.258 | 0.953 | D | 0.553 | 0.318 | None | gnomAD-4.0.0 | 2.09579E-03 | None | None | None | None | N | None | 4.14361E-04 | 2.18539E-04 | None | 3.39859E-05 | 0 | None | 5.32265E-04 | 9.94695E-04 | 2.61858E-03 | 1.07804E-03 | 1.71788E-03 |
E/Q | rs72648958 | -0.495 | 0.99 | N | 0.571 | 0.259 | 0.303781844768 | gnomAD-2.1.1 | 4.08E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.97E-06 | 0 |
E/Q | rs72648958 | -0.495 | 0.99 | N | 0.571 | 0.259 | 0.303781844768 | gnomAD-4.0.0 | 1.37384E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80409E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1653 | likely_benign | 0.152 | benign | -0.565 | Destabilizing | 0.917 | D | 0.55 | neutral | N | 0.501723578 | None | None | N |
E/C | 0.8645 | likely_pathogenic | 0.8586 | pathogenic | -0.284 | Destabilizing | 0.999 | D | 0.741 | deleterious | None | None | None | None | N |
E/D | 0.1961 | likely_benign | 0.1614 | benign | -0.995 | Destabilizing | 0.415 | N | 0.541 | neutral | D | 0.537273285 | None | None | N |
E/F | 0.72 | likely_pathogenic | 0.6891 | pathogenic | -0.499 | Destabilizing | 0.995 | D | 0.735 | prob.delet. | None | None | None | None | N |
E/G | 0.2234 | likely_benign | 0.2039 | benign | -0.88 | Destabilizing | 0.103 | N | 0.419 | neutral | N | 0.510650801 | None | None | N |
E/H | 0.4348 | ambiguous | 0.3946 | ambiguous | -0.969 | Destabilizing | 0.123 | N | 0.397 | neutral | None | None | None | None | N |
E/I | 0.3286 | likely_benign | 0.3146 | benign | 0.273 | Stabilizing | 0.996 | D | 0.727 | prob.delet. | None | None | None | None | N |
E/K | 0.1937 | likely_benign | 0.1773 | benign | -0.77 | Destabilizing | 0.953 | D | 0.553 | neutral | D | 0.532000751 | None | None | N |
E/L | 0.3964 | ambiguous | 0.3777 | ambiguous | 0.273 | Stabilizing | 0.989 | D | 0.679 | prob.neutral | None | None | None | None | N |
E/M | 0.4811 | ambiguous | 0.4616 | ambiguous | 0.751 | Stabilizing | 0.995 | D | 0.711 | prob.delet. | None | None | None | None | N |
E/N | 0.3179 | likely_benign | 0.268 | benign | -0.92 | Destabilizing | 0.073 | N | 0.445 | neutral | None | None | None | None | N |
E/P | 0.8501 | likely_pathogenic | 0.8197 | pathogenic | 0.015 | Stabilizing | 0.976 | D | 0.657 | neutral | None | None | None | None | N |
E/Q | 0.1192 | likely_benign | 0.1089 | benign | -0.802 | Destabilizing | 0.99 | D | 0.571 | neutral | N | 0.491674282 | None | None | N |
E/R | 0.3053 | likely_benign | 0.2811 | benign | -0.654 | Destabilizing | 0.995 | D | 0.562 | neutral | None | None | None | None | N |
E/S | 0.216 | likely_benign | 0.1879 | benign | -1.224 | Destabilizing | 0.936 | D | 0.526 | neutral | None | None | None | None | N |
E/T | 0.2152 | likely_benign | 0.1918 | benign | -0.985 | Destabilizing | 0.953 | D | 0.588 | neutral | None | None | None | None | N |
E/V | 0.1987 | likely_benign | 0.1905 | benign | 0.015 | Stabilizing | 0.993 | D | 0.66 | neutral | N | 0.494610461 | None | None | N |
E/W | 0.9076 | likely_pathogenic | 0.8923 | pathogenic | -0.501 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
E/Y | 0.6381 | likely_pathogenic | 0.6022 | pathogenic | -0.35 | Destabilizing | 0.996 | D | 0.705 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.