Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6783 | 20572;20573;20574 | chr2:178725975;178725974;178725973 | chr2:179590702;179590701;179590700 |
N2AB | 6466 | 19621;19622;19623 | chr2:178725975;178725974;178725973 | chr2:179590702;179590701;179590700 |
N2A | 5539 | 16840;16841;16842 | chr2:178725975;178725974;178725973 | chr2:179590702;179590701;179590700 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/V | None | None | 0.99 | N | 0.676 | 0.518 | 0.701518117412 | gnomAD-4.0.0 | 1.37092E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.33187E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1886 | likely_benign | 0.1908 | benign | -0.891 | Destabilizing | 0.959 | D | 0.601 | neutral | N | 0.494037349 | None | None | I |
E/C | 0.8563 | likely_pathogenic | 0.8645 | pathogenic | -0.402 | Destabilizing | 1.0 | D | 0.662 | neutral | None | None | None | None | I |
E/D | 0.2242 | likely_benign | 0.2032 | benign | -1.135 | Destabilizing | 0.753 | D | 0.523 | neutral | N | 0.487872057 | None | None | I |
E/F | 0.6659 | likely_pathogenic | 0.6532 | pathogenic | -0.672 | Destabilizing | 0.998 | D | 0.7 | prob.neutral | None | None | None | None | I |
E/G | 0.2673 | likely_benign | 0.2686 | benign | -1.238 | Destabilizing | 0.994 | D | 0.661 | neutral | N | 0.506256255 | None | None | I |
E/H | 0.4036 | ambiguous | 0.3885 | ambiguous | -1.021 | Destabilizing | 0.231 | N | 0.439 | neutral | None | None | None | None | I |
E/I | 0.2607 | likely_benign | 0.2813 | benign | 0.047 | Stabilizing | 0.998 | D | 0.713 | prob.delet. | None | None | None | None | I |
E/K | 0.1247 | likely_benign | 0.1332 | benign | -0.606 | Destabilizing | 0.956 | D | 0.571 | neutral | N | 0.521282326 | None | None | I |
E/L | 0.3288 | likely_benign | 0.348 | ambiguous | 0.047 | Stabilizing | 0.99 | D | 0.675 | prob.neutral | None | None | None | None | I |
E/M | 0.3851 | ambiguous | 0.4065 | ambiguous | 0.618 | Stabilizing | 0.997 | D | 0.689 | prob.neutral | None | None | None | None | I |
E/N | 0.2951 | likely_benign | 0.2902 | benign | -0.987 | Destabilizing | 0.978 | D | 0.643 | neutral | None | None | None | None | I |
E/P | 0.8943 | likely_pathogenic | 0.8938 | pathogenic | -0.244 | Destabilizing | 0.989 | D | 0.717 | prob.delet. | None | None | None | None | I |
E/Q | 0.1116 | likely_benign | 0.1108 | benign | -0.869 | Destabilizing | 0.739 | D | 0.384 | neutral | N | 0.499349615 | None | None | I |
E/R | 0.2245 | likely_benign | 0.2325 | benign | -0.471 | Destabilizing | 0.995 | D | 0.638 | neutral | None | None | None | None | I |
E/S | 0.2217 | likely_benign | 0.2182 | benign | -1.327 | Destabilizing | 0.969 | D | 0.578 | neutral | None | None | None | None | I |
E/T | 0.1931 | likely_benign | 0.2035 | benign | -1.036 | Destabilizing | 0.997 | D | 0.699 | prob.neutral | None | None | None | None | I |
E/V | 0.167 | likely_benign | 0.1804 | benign | -0.244 | Destabilizing | 0.99 | D | 0.676 | prob.neutral | N | 0.489633257 | None | None | I |
E/W | 0.8954 | likely_pathogenic | 0.8908 | pathogenic | -0.526 | Destabilizing | 1.0 | D | 0.658 | neutral | None | None | None | None | I |
E/Y | 0.6009 | likely_pathogenic | 0.5875 | pathogenic | -0.44 | Destabilizing | 0.998 | D | 0.707 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.