Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6784 | 20575;20576;20577 | chr2:178725972;178725971;178725970 | chr2:179590699;179590698;179590697 |
N2AB | 6467 | 19624;19625;19626 | chr2:178725972;178725971;178725970 | chr2:179590699;179590698;179590697 |
N2A | 5540 | 16843;16844;16845 | chr2:178725972;178725971;178725970 | chr2:179590699;179590698;179590697 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 0.969 | N | 0.783 | 0.309 | 0.371903410333 | gnomAD-4.0.0 | 1.37097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80139E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.7966 | likely_pathogenic | 0.8444 | pathogenic | -2.324 | Highly Destabilizing | 0.924 | D | 0.727 | prob.delet. | None | None | None | None | N |
L/C | 0.8402 | likely_pathogenic | 0.8925 | pathogenic | -1.797 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
L/D | 0.9951 | likely_pathogenic | 0.9968 | pathogenic | -2.189 | Highly Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
L/E | 0.9755 | likely_pathogenic | 0.9822 | pathogenic | -1.944 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
L/F | 0.3242 | likely_benign | 0.3524 | ambiguous | -1.379 | Destabilizing | 0.969 | D | 0.783 | deleterious | N | 0.517647374 | None | None | N |
L/G | 0.9622 | likely_pathogenic | 0.9752 | pathogenic | -2.88 | Highly Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
L/H | 0.925 | likely_pathogenic | 0.9449 | pathogenic | -2.345 | Highly Destabilizing | 0.999 | D | 0.827 | deleterious | N | 0.494962401 | None | None | N |
L/I | 0.0735 | likely_benign | 0.0709 | benign | -0.712 | Destabilizing | 0.001 | N | 0.236 | neutral | N | 0.438084939 | None | None | N |
L/K | 0.9584 | likely_pathogenic | 0.9676 | pathogenic | -1.454 | Destabilizing | 0.995 | D | 0.816 | deleterious | None | None | None | None | N |
L/M | 0.2239 | likely_benign | 0.22 | benign | -0.892 | Destabilizing | 0.925 | D | 0.755 | deleterious | None | None | None | None | N |
L/N | 0.9643 | likely_pathogenic | 0.9734 | pathogenic | -1.81 | Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | N |
L/P | 0.9654 | likely_pathogenic | 0.9783 | pathogenic | -1.231 | Destabilizing | 1.0 | D | 0.846 | deleterious | N | 0.497330817 | None | None | N |
L/Q | 0.9182 | likely_pathogenic | 0.9367 | pathogenic | -1.622 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
L/R | 0.9224 | likely_pathogenic | 0.9402 | pathogenic | -1.363 | Destabilizing | 1.0 | D | 0.807 | deleterious | N | 0.501710351 | None | None | N |
L/S | 0.943 | likely_pathogenic | 0.9614 | pathogenic | -2.603 | Highly Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
L/T | 0.8083 | likely_pathogenic | 0.8581 | pathogenic | -2.2 | Highly Destabilizing | 0.898 | D | 0.775 | deleterious | None | None | None | None | N |
L/V | 0.108 | likely_benign | 0.1121 | benign | -1.231 | Destabilizing | 0.005 | N | 0.245 | neutral | N | 0.380241783 | None | None | N |
L/W | 0.8199 | likely_pathogenic | 0.8616 | pathogenic | -1.673 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
L/Y | 0.7996 | likely_pathogenic | 0.8336 | pathogenic | -1.387 | Destabilizing | 0.907 | D | 0.791 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.