Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6789 | 20590;20591;20592 | chr2:178725957;178725956;178725955 | chr2:179590684;179590683;179590682 |
N2AB | 6472 | 19639;19640;19641 | chr2:178725957;178725956;178725955 | chr2:179590684;179590683;179590682 |
N2A | 5545 | 16858;16859;16860 | chr2:178725957;178725956;178725955 | chr2:179590684;179590683;179590682 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs1480351925 | 0.098 | 1.0 | N | 0.689 | 0.466 | 0.813777372686 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
P/L | rs1480351925 | 0.098 | 1.0 | N | 0.689 | 0.466 | 0.813777372686 | gnomAD-4.0.0 | 1.02734E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.35015E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.2706 | likely_benign | 0.3563 | ambiguous | -0.641 | Destabilizing | 0.996 | D | 0.658 | neutral | N | 0.517415301 | None | None | N |
P/C | 0.9156 | likely_pathogenic | 0.9551 | pathogenic | -0.485 | Destabilizing | 1.0 | D | 0.662 | neutral | None | None | None | None | N |
P/D | 0.7995 | likely_pathogenic | 0.8507 | pathogenic | -0.686 | Destabilizing | 0.996 | D | 0.669 | neutral | None | None | None | None | N |
P/E | 0.6834 | likely_pathogenic | 0.7759 | pathogenic | -0.775 | Destabilizing | 0.998 | D | 0.681 | prob.neutral | None | None | None | None | N |
P/F | 0.8963 | likely_pathogenic | 0.9397 | pathogenic | -0.769 | Destabilizing | 1.0 | D | 0.627 | neutral | None | None | None | None | N |
P/G | 0.7343 | likely_pathogenic | 0.7887 | pathogenic | -0.807 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | N |
P/H | 0.627 | likely_pathogenic | 0.7327 | pathogenic | -0.424 | Destabilizing | 1.0 | D | 0.637 | neutral | None | None | None | None | N |
P/I | 0.7415 | likely_pathogenic | 0.799 | pathogenic | -0.332 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | N |
P/K | 0.77 | likely_pathogenic | 0.8427 | pathogenic | -0.638 | Destabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | N |
P/L | 0.4215 | ambiguous | 0.5534 | ambiguous | -0.332 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | N | 0.502987344 | None | None | N |
P/M | 0.7556 | likely_pathogenic | 0.8227 | pathogenic | -0.409 | Destabilizing | 1.0 | D | 0.64 | neutral | None | None | None | None | N |
P/N | 0.7328 | likely_pathogenic | 0.7881 | pathogenic | -0.283 | Destabilizing | 0.999 | D | 0.685 | prob.neutral | None | None | None | None | N |
P/Q | 0.548 | ambiguous | 0.6574 | pathogenic | -0.522 | Destabilizing | 1.0 | D | 0.652 | neutral | N | 0.485804461 | None | None | N |
P/R | 0.5911 | likely_pathogenic | 0.7065 | pathogenic | -0.119 | Destabilizing | 1.0 | D | 0.675 | prob.neutral | N | 0.49525189 | None | None | N |
P/S | 0.4413 | ambiguous | 0.5493 | ambiguous | -0.586 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | N | 0.48807264 | None | None | N |
P/T | 0.3981 | ambiguous | 0.4782 | ambiguous | -0.582 | Destabilizing | 0.999 | D | 0.685 | prob.neutral | D | 0.531709963 | None | None | N |
P/V | 0.5881 | likely_pathogenic | 0.657 | pathogenic | -0.401 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
P/W | 0.9619 | likely_pathogenic | 0.9791 | pathogenic | -0.885 | Destabilizing | 1.0 | D | 0.676 | prob.neutral | None | None | None | None | N |
P/Y | 0.8726 | likely_pathogenic | 0.9176 | pathogenic | -0.594 | Destabilizing | 1.0 | D | 0.638 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.