Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6793 | 20602;20603;20604 | chr2:178725945;178725944;178725943 | chr2:179590672;179590671;179590670 |
N2AB | 6476 | 19651;19652;19653 | chr2:178725945;178725944;178725943 | chr2:179590672;179590671;179590670 |
N2A | 5549 | 16870;16871;16872 | chr2:178725945;178725944;178725943 | chr2:179590672;179590671;179590670 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs2079262565 | None | None | N | 0.205 | 0.053 | 0.515490261806 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1091 | likely_benign | 0.107 | benign | -1.6 | Destabilizing | None | N | 0.173 | neutral | N | 0.476126039 | None | None | N |
V/C | 0.6155 | likely_pathogenic | 0.6337 | pathogenic | -0.742 | Destabilizing | 0.628 | D | 0.541 | neutral | None | None | None | None | N |
V/D | 0.3449 | ambiguous | 0.3172 | benign | -1.808 | Destabilizing | 0.072 | N | 0.548 | neutral | None | None | None | None | N |
V/E | 0.2948 | likely_benign | 0.2751 | benign | -1.751 | Destabilizing | 0.055 | N | 0.483 | neutral | N | 0.465138254 | None | None | N |
V/F | 0.1135 | likely_benign | 0.1057 | benign | -1.136 | Destabilizing | 0.072 | N | 0.573 | neutral | None | None | None | None | N |
V/G | 0.1739 | likely_benign | 0.1612 | benign | -1.96 | Destabilizing | 0.012 | N | 0.481 | neutral | N | 0.487187267 | None | None | N |
V/H | 0.3898 | ambiguous | 0.3734 | ambiguous | -1.574 | Destabilizing | 0.628 | D | 0.567 | neutral | None | None | None | None | N |
V/I | 0.0639 | likely_benign | 0.0651 | benign | -0.676 | Destabilizing | None | N | 0.205 | neutral | N | 0.489634054 | None | None | N |
V/K | 0.3562 | ambiguous | 0.338 | benign | -1.354 | Destabilizing | 0.072 | N | 0.484 | neutral | None | None | None | None | N |
V/L | 0.1121 | likely_benign | 0.1097 | benign | -0.676 | Destabilizing | None | N | 0.209 | neutral | N | 0.489460696 | None | None | N |
V/M | 0.0904 | likely_benign | 0.0888 | benign | -0.382 | Destabilizing | 0.214 | N | 0.522 | neutral | None | None | None | None | N |
V/N | 0.142 | likely_benign | 0.132 | benign | -1.202 | Destabilizing | 0.072 | N | 0.551 | neutral | None | None | None | None | N |
V/P | 0.8614 | likely_pathogenic | 0.8524 | pathogenic | -0.953 | Destabilizing | 0.136 | N | 0.549 | neutral | None | None | None | None | N |
V/Q | 0.2483 | likely_benign | 0.2331 | benign | -1.316 | Destabilizing | 0.356 | N | 0.566 | neutral | None | None | None | None | N |
V/R | 0.3351 | likely_benign | 0.3155 | benign | -0.856 | Destabilizing | 0.072 | N | 0.593 | neutral | None | None | None | None | N |
V/S | 0.1042 | likely_benign | 0.0995 | benign | -1.668 | Destabilizing | None | N | 0.381 | neutral | None | None | None | None | N |
V/T | 0.0864 | likely_benign | 0.0858 | benign | -1.51 | Destabilizing | None | N | 0.18 | neutral | None | None | None | None | N |
V/W | 0.6915 | likely_pathogenic | 0.6793 | pathogenic | -1.475 | Destabilizing | 0.864 | D | 0.591 | neutral | None | None | None | None | N |
V/Y | 0.3909 | ambiguous | 0.375 | ambiguous | -1.146 | Destabilizing | 0.356 | N | 0.558 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.