Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6800 | 20623;20624;20625 | chr2:178725924;178725923;178725922 | chr2:179590651;179590650;179590649 |
N2AB | 6483 | 19672;19673;19674 | chr2:178725924;178725923;178725922 | chr2:179590651;179590650;179590649 |
N2A | 5556 | 16891;16892;16893 | chr2:178725924;178725923;178725922 | chr2:179590651;179590650;179590649 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/H | None | None | 0.966 | N | 0.375 | 0.229 | 0.313518423057 | gnomAD-4.0.0 | 1.59296E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86105E-06 | 0 | 0 |
Q/K | rs1345237907 | 0.095 | 0.454 | N | 0.303 | 0.171 | 0.204665344411 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
Q/K | rs1345237907 | 0.095 | 0.454 | N | 0.303 | 0.171 | 0.204665344411 | gnomAD-4.0.0 | 1.59305E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86115E-06 | 0 | 0 |
Q/P | None | None | 0.966 | N | 0.365 | 0.298 | 0.4018988957 | gnomAD-4.0.0 | 1.59297E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86098E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2127 | likely_benign | 0.2074 | benign | -0.402 | Destabilizing | 0.688 | D | 0.302 | neutral | None | None | None | None | N |
Q/C | 0.8204 | likely_pathogenic | 0.8332 | pathogenic | -0.065 | Destabilizing | 0.998 | D | 0.448 | neutral | None | None | None | None | N |
Q/D | 0.7632 | likely_pathogenic | 0.7384 | pathogenic | 0.047 | Stabilizing | 0.525 | D | 0.269 | neutral | None | None | None | None | N |
Q/E | 0.1201 | likely_benign | 0.1133 | benign | 0.113 | Stabilizing | 0.002 | N | 0.103 | neutral | N | 0.435471495 | None | None | N |
Q/F | 0.7756 | likely_pathogenic | 0.772 | pathogenic | -0.261 | Destabilizing | 0.949 | D | 0.458 | neutral | None | None | None | None | N |
Q/G | 0.5093 | ambiguous | 0.4791 | ambiguous | -0.689 | Destabilizing | 0.842 | D | 0.341 | neutral | None | None | None | None | N |
Q/H | 0.4186 | ambiguous | 0.395 | ambiguous | -0.29 | Destabilizing | 0.966 | D | 0.375 | neutral | N | 0.485163032 | None | None | N |
Q/I | 0.2664 | likely_benign | 0.2944 | benign | 0.301 | Stabilizing | 0.728 | D | 0.391 | neutral | None | None | None | None | N |
Q/K | 0.1835 | likely_benign | 0.1669 | benign | -0.088 | Destabilizing | 0.454 | N | 0.303 | neutral | N | 0.516721868 | None | None | N |
Q/L | 0.1158 | likely_benign | 0.1217 | benign | 0.301 | Stabilizing | 0.012 | N | 0.243 | neutral | N | 0.474011241 | None | None | N |
Q/M | 0.2956 | likely_benign | 0.3147 | benign | 0.297 | Stabilizing | 0.949 | D | 0.379 | neutral | None | None | None | None | N |
Q/N | 0.4722 | ambiguous | 0.4614 | ambiguous | -0.622 | Destabilizing | 0.842 | D | 0.311 | neutral | None | None | None | None | N |
Q/P | 0.079 | likely_benign | 0.0834 | benign | 0.097 | Stabilizing | 0.966 | D | 0.365 | neutral | N | 0.444611053 | None | None | N |
Q/R | 0.2622 | likely_benign | 0.2355 | benign | 0.064 | Stabilizing | 0.801 | D | 0.261 | neutral | N | 0.510201327 | None | None | N |
Q/S | 0.3692 | ambiguous | 0.353 | ambiguous | -0.695 | Destabilizing | 0.688 | D | 0.246 | neutral | None | None | None | None | N |
Q/T | 0.2604 | likely_benign | 0.2613 | benign | -0.448 | Destabilizing | 0.842 | D | 0.288 | neutral | None | None | None | None | N |
Q/V | 0.1881 | likely_benign | 0.2079 | benign | 0.097 | Stabilizing | 0.728 | D | 0.337 | neutral | None | None | None | None | N |
Q/W | 0.8098 | likely_pathogenic | 0.8091 | pathogenic | -0.2 | Destabilizing | 0.998 | D | 0.453 | neutral | None | None | None | None | N |
Q/Y | 0.6592 | likely_pathogenic | 0.658 | pathogenic | 0.048 | Stabilizing | 0.991 | D | 0.387 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.