Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6801 | 20626;20627;20628 | chr2:178725921;178725920;178725919 | chr2:179590648;179590647;179590646 |
N2AB | 6484 | 19675;19676;19677 | chr2:178725921;178725920;178725919 | chr2:179590648;179590647;179590646 |
N2A | 5557 | 16894;16895;16896 | chr2:178725921;178725920;178725919 | chr2:179590648;179590647;179590646 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/H | None | None | 1.0 | D | 0.795 | 0.793 | 0.919573595275 | gnomAD-4.0.0 | 3.18587E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.722E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8616 | likely_pathogenic | 0.857 | pathogenic | -2.24 | Highly Destabilizing | 0.996 | D | 0.546 | neutral | None | None | None | None | N |
L/C | 0.8837 | likely_pathogenic | 0.8948 | pathogenic | -1.361 | Destabilizing | 1.0 | D | 0.702 | prob.neutral | None | None | None | None | N |
L/D | 0.9966 | likely_pathogenic | 0.9964 | pathogenic | -2.801 | Highly Destabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | N |
L/E | 0.967 | likely_pathogenic | 0.9624 | pathogenic | -2.528 | Highly Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
L/F | 0.4819 | ambiguous | 0.4382 | ambiguous | -1.453 | Destabilizing | 0.997 | D | 0.623 | neutral | N | 0.5216853 | None | None | N |
L/G | 0.9743 | likely_pathogenic | 0.9734 | pathogenic | -2.763 | Highly Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
L/H | 0.924 | likely_pathogenic | 0.9096 | pathogenic | -2.275 | Highly Destabilizing | 1.0 | D | 0.795 | deleterious | D | 0.554793165 | None | None | N |
L/I | 0.0768 | likely_benign | 0.0742 | benign | -0.698 | Destabilizing | 0.008 | N | 0.238 | neutral | N | 0.445904706 | None | None | N |
L/K | 0.9473 | likely_pathogenic | 0.9408 | pathogenic | -1.762 | Destabilizing | 0.983 | D | 0.749 | deleterious | None | None | None | None | N |
L/M | 0.2329 | likely_benign | 0.2126 | benign | -0.627 | Destabilizing | 0.992 | D | 0.674 | neutral | None | None | None | None | N |
L/N | 0.9706 | likely_pathogenic | 0.9669 | pathogenic | -2.338 | Highly Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
L/P | 0.9677 | likely_pathogenic | 0.9654 | pathogenic | -1.199 | Destabilizing | 1.0 | D | 0.822 | deleterious | D | 0.53643542 | None | None | N |
L/Q | 0.8657 | likely_pathogenic | 0.8395 | pathogenic | -2.086 | Highly Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
L/R | 0.9197 | likely_pathogenic | 0.9074 | pathogenic | -1.732 | Destabilizing | 0.999 | D | 0.759 | deleterious | D | 0.53643542 | None | None | N |
L/S | 0.9606 | likely_pathogenic | 0.956 | pathogenic | -2.907 | Highly Destabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | N |
L/T | 0.8774 | likely_pathogenic | 0.8705 | pathogenic | -2.48 | Highly Destabilizing | 0.997 | D | 0.678 | prob.neutral | None | None | None | None | N |
L/V | 0.1248 | likely_benign | 0.1174 | benign | -1.199 | Destabilizing | 0.628 | D | 0.392 | neutral | N | 0.480422712 | None | None | N |
L/W | 0.8103 | likely_pathogenic | 0.7973 | pathogenic | -1.809 | Destabilizing | 1.0 | D | 0.728 | prob.delet. | None | None | None | None | N |
L/Y | 0.8607 | likely_pathogenic | 0.8454 | pathogenic | -1.482 | Destabilizing | 0.996 | D | 0.726 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.