Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6809 | 20650;20651;20652 | chr2:178725897;178725896;178725895 | chr2:179590624;179590623;179590622 |
N2AB | 6492 | 19699;19700;19701 | chr2:178725897;178725896;178725895 | chr2:179590624;179590623;179590622 |
N2A | 5565 | 16918;16919;16920 | chr2:178725897;178725896;178725895 | chr2:179590624;179590623;179590622 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/F | None | None | None | N | 0.111 | 0.16 | 0.351614576976 | gnomAD-4.0.0 | 1.59281E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8608E-06 | 0 | 0 |
I/T | rs879197315 | -1.512 | 0.09 | N | 0.479 | 0.325 | None | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 1.14943E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
I/T | rs879197315 | -1.512 | 0.09 | N | 0.479 | 0.325 | None | gnomAD-3.1.2 | 3.29E-05 | None | None | None | None | N | None | 1.20814E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/T | rs879197315 | -1.512 | 0.09 | N | 0.479 | 0.325 | None | gnomAD-4.0.0 | 6.19994E-06 | None | None | None | None | N | None | 9.35529E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.54355E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.3755 | ambiguous | 0.4277 | ambiguous | -1.953 | Destabilizing | 0.153 | N | 0.429 | neutral | None | None | None | None | N |
I/C | 0.7993 | likely_pathogenic | 0.8584 | pathogenic | -1.347 | Destabilizing | 0.959 | D | 0.545 | neutral | None | None | None | None | N |
I/D | 0.9166 | likely_pathogenic | 0.9344 | pathogenic | -1.145 | Destabilizing | 0.862 | D | 0.623 | neutral | None | None | None | None | N |
I/E | 0.8173 | likely_pathogenic | 0.853 | pathogenic | -1.056 | Destabilizing | 0.821 | D | 0.631 | neutral | None | None | None | None | N |
I/F | 0.1658 | likely_benign | 0.1791 | benign | -1.234 | Destabilizing | None | N | 0.111 | neutral | N | 0.521439828 | None | None | N |
I/G | 0.7835 | likely_pathogenic | 0.8388 | pathogenic | -2.374 | Highly Destabilizing | 0.862 | D | 0.619 | neutral | None | None | None | None | N |
I/H | 0.7716 | likely_pathogenic | 0.7941 | pathogenic | -1.566 | Destabilizing | 0.967 | D | 0.612 | neutral | None | None | None | None | N |
I/K | 0.709 | likely_pathogenic | 0.7588 | pathogenic | -1.263 | Destabilizing | 0.155 | N | 0.631 | neutral | None | None | None | None | N |
I/L | 0.1299 | likely_benign | 0.1582 | benign | -0.823 | Destabilizing | 0.002 | N | 0.275 | neutral | N | 0.496445383 | None | None | N |
I/M | 0.0962 | likely_benign | 0.1051 | benign | -0.744 | Destabilizing | 0.217 | N | 0.533 | neutral | D | 0.531520749 | None | None | N |
I/N | 0.5677 | likely_pathogenic | 0.6028 | pathogenic | -1.209 | Destabilizing | 0.935 | D | 0.63 | neutral | D | 0.528794736 | None | None | N |
I/P | 0.8746 | likely_pathogenic | 0.9069 | pathogenic | -1.17 | Destabilizing | 0.95 | D | 0.623 | neutral | None | None | None | None | N |
I/Q | 0.6878 | likely_pathogenic | 0.7212 | pathogenic | -1.258 | Destabilizing | 0.887 | D | 0.619 | neutral | None | None | None | None | N |
I/R | 0.6039 | likely_pathogenic | 0.667 | pathogenic | -0.822 | Destabilizing | 0.712 | D | 0.631 | neutral | None | None | None | None | N |
I/S | 0.4603 | ambiguous | 0.5133 | ambiguous | -1.986 | Destabilizing | 0.398 | N | 0.581 | neutral | N | 0.506309161 | None | None | N |
I/T | 0.2124 | likely_benign | 0.2359 | benign | -1.758 | Destabilizing | 0.09 | N | 0.479 | neutral | N | 0.497243807 | None | None | N |
I/V | 0.0759 | likely_benign | 0.0826 | benign | -1.17 | Destabilizing | None | N | 0.121 | neutral | N | 0.479856991 | None | None | N |
I/W | 0.8094 | likely_pathogenic | 0.8365 | pathogenic | -1.352 | Destabilizing | 0.991 | D | 0.616 | neutral | None | None | None | None | N |
I/Y | 0.5685 | likely_pathogenic | 0.6094 | pathogenic | -1.105 | Destabilizing | 0.02 | N | 0.535 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.