Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6810 | 20653;20654;20655 | chr2:178725894;178725893;178725892 | chr2:179590621;179590620;179590619 |
N2AB | 6493 | 19702;19703;19704 | chr2:178725894;178725893;178725892 | chr2:179590621;179590620;179590619 |
N2A | 5566 | 16921;16922;16923 | chr2:178725894;178725893;178725892 | chr2:179590621;179590620;179590619 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.001 | N | 0.1 | 0.09 | 0.0482279557977 | gnomAD-4.0.0 | 6.84492E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99716E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4399 | ambiguous | 0.4896 | ambiguous | -0.687 | Destabilizing | 0.94 | D | 0.408 | neutral | None | None | None | None | N |
A/D | 0.3008 | likely_benign | 0.3021 | benign | -0.42 | Destabilizing | 0.418 | N | 0.45 | neutral | None | None | None | None | N |
A/E | 0.2793 | likely_benign | 0.2877 | benign | -0.564 | Destabilizing | 0.351 | N | 0.403 | neutral | N | 0.394414306 | None | None | N |
A/F | 0.1959 | likely_benign | 0.2028 | benign | -0.866 | Destabilizing | 0.716 | D | 0.499 | neutral | None | None | None | None | N |
A/G | 0.1696 | likely_benign | 0.1587 | benign | -0.375 | Destabilizing | 0.101 | N | 0.29 | neutral | N | 0.449211583 | None | None | N |
A/H | 0.3845 | ambiguous | 0.4004 | ambiguous | -0.436 | Destabilizing | 0.836 | D | 0.463 | neutral | None | None | None | None | N |
A/I | 0.1332 | likely_benign | 0.1431 | benign | -0.263 | Destabilizing | 0.129 | N | 0.385 | neutral | None | None | None | None | N |
A/K | 0.4859 | ambiguous | 0.5164 | ambiguous | -0.626 | Destabilizing | 0.264 | N | 0.406 | neutral | None | None | None | None | N |
A/L | 0.1174 | likely_benign | 0.1223 | benign | -0.263 | Destabilizing | 0.022 | N | 0.332 | neutral | None | None | None | None | N |
A/M | 0.1514 | likely_benign | 0.1614 | benign | -0.266 | Destabilizing | 0.061 | N | 0.255 | neutral | None | None | None | None | N |
A/N | 0.1901 | likely_benign | 0.1883 | benign | -0.258 | Destabilizing | 0.264 | N | 0.479 | neutral | None | None | None | None | N |
A/P | 0.662 | likely_pathogenic | 0.6476 | pathogenic | -0.236 | Destabilizing | 0.523 | D | 0.431 | neutral | N | 0.451809171 | None | None | N |
A/Q | 0.3359 | likely_benign | 0.338 | benign | -0.535 | Destabilizing | 0.716 | D | 0.454 | neutral | None | None | None | None | N |
A/R | 0.424 | ambiguous | 0.4543 | ambiguous | -0.172 | Destabilizing | 0.716 | D | 0.454 | neutral | None | None | None | None | N |
A/S | 0.0788 | likely_benign | 0.0787 | benign | -0.496 | Destabilizing | 0.003 | N | 0.121 | neutral | N | 0.369190575 | None | None | N |
A/T | 0.0637 | likely_benign | 0.0654 | benign | -0.556 | Destabilizing | 0.001 | N | 0.1 | neutral | N | 0.355837276 | None | None | N |
A/V | 0.0897 | likely_benign | 0.0921 | benign | -0.236 | Destabilizing | 0.001 | N | 0.111 | neutral | N | 0.383872026 | None | None | N |
A/W | 0.6462 | likely_pathogenic | 0.6372 | pathogenic | -1.028 | Destabilizing | 0.983 | D | 0.513 | neutral | None | None | None | None | N |
A/Y | 0.3309 | likely_benign | 0.3391 | benign | -0.659 | Destabilizing | 0.836 | D | 0.487 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.