Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6811 | 20656;20657;20658 | chr2:178725891;178725890;178725889 | chr2:179590618;179590617;179590616 |
N2AB | 6494 | 19705;19706;19707 | chr2:178725891;178725890;178725889 | chr2:179590618;179590617;179590616 |
N2A | 5567 | 16924;16925;16926 | chr2:178725891;178725890;178725889 | chr2:179590618;179590617;179590616 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | None | None | 0.754 | D | 0.659 | 0.22 | 0.152612264143 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0813 | likely_benign | 0.0714 | benign | -0.286 | Destabilizing | None | N | 0.255 | neutral | D | 0.532960757 | None | None | N |
S/C | 0.185 | likely_benign | 0.1674 | benign | -0.228 | Destabilizing | 0.007 | N | 0.46 | neutral | D | 0.530499348 | None | None | N |
S/D | 0.6628 | likely_pathogenic | 0.6115 | pathogenic | 0.232 | Stabilizing | 0.222 | N | 0.581 | neutral | None | None | None | None | N |
S/E | 0.6855 | likely_pathogenic | 0.6471 | pathogenic | 0.136 | Stabilizing | 0.444 | N | 0.582 | neutral | None | None | None | None | N |
S/F | 0.2785 | likely_benign | 0.2221 | benign | -0.894 | Destabilizing | 0.012 | N | 0.493 | neutral | N | 0.497391483 | None | None | N |
S/G | 0.1515 | likely_benign | 0.1226 | benign | -0.392 | Destabilizing | 0.179 | N | 0.523 | neutral | None | None | None | None | N |
S/H | 0.501 | ambiguous | 0.4429 | ambiguous | -0.937 | Destabilizing | 0.938 | D | 0.628 | neutral | None | None | None | None | N |
S/I | 0.2597 | likely_benign | 0.2099 | benign | -0.142 | Destabilizing | 0.789 | D | 0.684 | prob.neutral | None | None | None | None | N |
S/K | 0.813 | likely_pathogenic | 0.7787 | pathogenic | -0.385 | Destabilizing | 0.681 | D | 0.583 | neutral | None | None | None | None | N |
S/L | 0.1342 | likely_benign | 0.115 | benign | -0.142 | Destabilizing | 0.517 | D | 0.633 | neutral | None | None | None | None | N |
S/M | 0.2898 | likely_benign | 0.2379 | benign | 0.076 | Stabilizing | 0.938 | D | 0.629 | neutral | None | None | None | None | N |
S/N | 0.2686 | likely_benign | 0.2076 | benign | -0.107 | Destabilizing | 0.001 | N | 0.323 | neutral | None | None | None | None | N |
S/P | 0.546 | ambiguous | 0.4922 | ambiguous | -0.161 | Destabilizing | 0.754 | D | 0.659 | neutral | D | 0.529037804 | None | None | N |
S/Q | 0.6043 | likely_pathogenic | 0.5578 | ambiguous | -0.358 | Destabilizing | 0.938 | D | 0.628 | neutral | None | None | None | None | N |
S/R | 0.7526 | likely_pathogenic | 0.723 | pathogenic | -0.219 | Destabilizing | 0.882 | D | 0.651 | neutral | None | None | None | None | N |
S/T | 0.1006 | likely_benign | 0.0931 | benign | -0.213 | Destabilizing | None | N | 0.321 | neutral | N | 0.489731708 | None | None | N |
S/V | 0.2086 | likely_benign | 0.1709 | benign | -0.161 | Destabilizing | 0.286 | N | 0.635 | neutral | None | None | None | None | N |
S/W | 0.4804 | ambiguous | 0.4278 | ambiguous | -0.91 | Destabilizing | 0.994 | D | 0.66 | neutral | None | None | None | None | N |
S/Y | 0.2591 | likely_benign | 0.2185 | benign | -0.617 | Destabilizing | 0.739 | D | 0.693 | prob.neutral | N | 0.488401808 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.