Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6813 | 20662;20663;20664 | chr2:178725885;178725884;178725883 | chr2:179590612;179590611;179590610 |
N2AB | 6496 | 19711;19712;19713 | chr2:178725885;178725884;178725883 | chr2:179590612;179590611;179590610 |
N2A | 5569 | 16930;16931;16932 | chr2:178725885;178725884;178725883 | chr2:179590612;179590611;179590610 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/H | None | None | 0.006 | N | 0.137 | 0.114 | 0.168933306366 | gnomAD-4.0.0 | 1.59261E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86049E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.3805 | ambiguous | 0.2941 | benign | -0.652 | Destabilizing | 0.015 | N | 0.268 | neutral | None | None | None | None | N |
N/C | 0.6078 | likely_pathogenic | 0.5428 | ambiguous | -0.076 | Destabilizing | 0.985 | D | 0.324 | neutral | None | None | None | None | N |
N/D | 0.1625 | likely_benign | 0.1254 | benign | -0.017 | Destabilizing | 0.001 | N | 0.112 | neutral | N | 0.500829696 | None | None | N |
N/E | 0.5256 | ambiguous | 0.4231 | ambiguous | 0.053 | Stabilizing | 0.135 | N | 0.191 | neutral | None | None | None | None | N |
N/F | 0.647 | likely_pathogenic | 0.5761 | pathogenic | -0.806 | Destabilizing | 0.953 | D | 0.337 | neutral | None | None | None | None | N |
N/G | 0.3758 | ambiguous | 0.2988 | benign | -0.904 | Destabilizing | 0.003 | N | 0.104 | neutral | None | None | None | None | N |
N/H | 0.1757 | likely_benign | 0.1492 | benign | -0.633 | Destabilizing | 0.006 | N | 0.137 | neutral | N | 0.484073395 | None | None | N |
N/I | 0.3648 | ambiguous | 0.3005 | benign | -0.041 | Destabilizing | 0.851 | D | 0.357 | neutral | N | 0.512470772 | None | None | N |
N/K | 0.4848 | ambiguous | 0.4288 | ambiguous | -0.012 | Destabilizing | 0.307 | N | 0.174 | neutral | N | 0.503870001 | None | None | N |
N/L | 0.3717 | ambiguous | 0.3332 | benign | -0.041 | Destabilizing | 0.515 | D | 0.293 | neutral | None | None | None | None | N |
N/M | 0.4673 | ambiguous | 0.4041 | ambiguous | -0.055 | Destabilizing | 0.958 | D | 0.303 | neutral | None | None | None | None | N |
N/P | 0.7223 | likely_pathogenic | 0.6264 | pathogenic | -0.218 | Destabilizing | 0.618 | D | 0.361 | neutral | None | None | None | None | N |
N/Q | 0.4684 | ambiguous | 0.3859 | ambiguous | -0.446 | Destabilizing | 0.014 | N | 0.097 | neutral | None | None | None | None | N |
N/R | 0.5453 | ambiguous | 0.5063 | ambiguous | -0.007 | Destabilizing | 0.009 | N | 0.137 | neutral | None | None | None | None | N |
N/S | 0.1515 | likely_benign | 0.1238 | benign | -0.543 | Destabilizing | 0.067 | N | 0.236 | neutral | D | 0.522898479 | None | None | N |
N/T | 0.2433 | likely_benign | 0.186 | benign | -0.296 | Destabilizing | 0.21 | N | 0.135 | neutral | D | 0.529787166 | None | None | N |
N/V | 0.4085 | ambiguous | 0.335 | benign | -0.218 | Destabilizing | 0.153 | N | 0.327 | neutral | None | None | None | None | N |
N/W | 0.8773 | likely_pathogenic | 0.8393 | pathogenic | -0.743 | Destabilizing | 0.996 | D | 0.344 | neutral | None | None | None | None | N |
N/Y | 0.2049 | likely_benign | 0.1832 | benign | -0.455 | Destabilizing | 0.882 | D | 0.345 | neutral | N | 0.494873496 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.