Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6814 | 20665;20666;20667 | chr2:178725882;178725881;178725880 | chr2:179590609;179590608;179590607 |
N2AB | 6497 | 19714;19715;19716 | chr2:178725882;178725881;178725880 | chr2:179590609;179590608;179590607 |
N2A | 5570 | 16933;16934;16935 | chr2:178725882;178725881;178725880 | chr2:179590609;179590608;179590607 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | rs1371961339 | -0.74 | 0.048 | N | 0.199 | 0.175 | 0.406945738958 | gnomAD-4.0.0 | 1.59269E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86058E-06 | 0 | 0 |
F/V | rs1371961339 | None | 0.143 | N | 0.407 | 0.14 | 0.554437859526 | gnomAD-4.0.0 | 1.59269E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86058E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.3835 | ambiguous | 0.3492 | ambiguous | -1.981 | Destabilizing | 0.138 | N | 0.343 | neutral | None | None | None | None | N |
F/C | 0.2362 | likely_benign | 0.2494 | benign | -1.062 | Destabilizing | 0.004 | N | 0.297 | neutral | N | 0.513086917 | None | None | N |
F/D | 0.4855 | ambiguous | 0.4543 | ambiguous | -0.337 | Destabilizing | 0.64 | D | 0.509 | neutral | None | None | None | None | N |
F/E | 0.6667 | likely_pathogenic | 0.651 | pathogenic | -0.239 | Destabilizing | 0.181 | N | 0.489 | neutral | None | None | None | None | N |
F/G | 0.4449 | ambiguous | 0.4489 | ambiguous | -2.31 | Highly Destabilizing | 0.424 | N | 0.471 | neutral | None | None | None | None | N |
F/H | 0.3237 | likely_benign | 0.3063 | benign | -0.513 | Destabilizing | 0.002 | N | 0.225 | neutral | None | None | None | None | N |
F/I | 0.1732 | likely_benign | 0.1525 | benign | -0.999 | Destabilizing | 0.358 | N | 0.277 | neutral | N | 0.5127402 | None | None | N |
F/K | 0.6088 | likely_pathogenic | 0.6167 | pathogenic | -1.097 | Destabilizing | 0.425 | N | 0.494 | neutral | None | None | None | None | N |
F/L | 0.6308 | likely_pathogenic | 0.6367 | pathogenic | -0.999 | Destabilizing | 0.048 | N | 0.199 | neutral | N | 0.483375379 | None | None | N |
F/M | 0.3813 | ambiguous | 0.3809 | ambiguous | -0.787 | Destabilizing | 0.599 | D | 0.361 | neutral | None | None | None | None | N |
F/N | 0.2705 | likely_benign | 0.2637 | benign | -1.197 | Destabilizing | 0.64 | D | 0.547 | neutral | None | None | None | None | N |
F/P | 0.9013 | likely_pathogenic | 0.8926 | pathogenic | -1.319 | Destabilizing | 0.002 | N | 0.306 | neutral | None | None | None | None | N |
F/Q | 0.5112 | ambiguous | 0.507 | ambiguous | -1.188 | Destabilizing | 0.348 | N | 0.564 | neutral | None | None | None | None | N |
F/R | 0.46 | ambiguous | 0.4601 | ambiguous | -0.541 | Destabilizing | 0.425 | N | 0.58 | neutral | None | None | None | None | N |
F/S | 0.2041 | likely_benign | 0.188 | benign | -2.031 | Highly Destabilizing | 0.022 | N | 0.252 | neutral | N | 0.429929602 | None | None | N |
F/T | 0.2946 | likely_benign | 0.2664 | benign | -1.836 | Destabilizing | 0.269 | N | 0.469 | neutral | None | None | None | None | N |
F/V | 0.1881 | likely_benign | 0.1666 | benign | -1.319 | Destabilizing | 0.143 | N | 0.407 | neutral | N | 0.512393483 | None | None | N |
F/W | 0.4601 | ambiguous | 0.4471 | ambiguous | -0.188 | Destabilizing | 0.876 | D | 0.415 | neutral | None | None | None | None | N |
F/Y | 0.0768 | likely_benign | 0.0724 | benign | -0.437 | Destabilizing | None | N | 0.117 | neutral | N | 0.475125961 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.