Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6830 | 20713;20714;20715 | chr2:178725834;178725833;178725832 | chr2:179590561;179590560;179590559 |
N2AB | 6513 | 19762;19763;19764 | chr2:178725834;178725833;178725832 | chr2:179590561;179590560;179590559 |
N2A | 5586 | 16981;16982;16983 | chr2:178725834;178725833;178725832 | chr2:179590561;179590560;179590559 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1458416906 | -0.261 | 0.877 | D | 0.554 | 0.303 | 0.31291088546 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
E/K | rs1458416906 | -0.261 | 0.877 | D | 0.554 | 0.303 | 0.31291088546 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/K | rs1458416906 | -0.261 | 0.877 | D | 0.554 | 0.303 | 0.31291088546 | gnomAD-4.0.0 | 6.57272E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.4702E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.185 | likely_benign | 0.1688 | benign | -0.813 | Destabilizing | 0.794 | D | 0.601 | neutral | N | 0.489922745 | None | None | N |
E/C | 0.895 | likely_pathogenic | 0.8566 | pathogenic | -0.347 | Destabilizing | 0.998 | D | 0.712 | prob.delet. | None | None | None | None | N |
E/D | 0.1103 | likely_benign | 0.1042 | benign | -0.91 | Destabilizing | 0.002 | N | 0.224 | neutral | N | 0.485575028 | None | None | N |
E/F | 0.7337 | likely_pathogenic | 0.6747 | pathogenic | -0.322 | Destabilizing | 0.971 | D | 0.725 | prob.delet. | None | None | None | None | N |
E/G | 0.283 | likely_benign | 0.2498 | benign | -1.145 | Destabilizing | 0.928 | D | 0.647 | neutral | N | 0.517118808 | None | None | N |
E/H | 0.5403 | ambiguous | 0.4898 | ambiguous | -0.505 | Destabilizing | 0.998 | D | 0.608 | neutral | None | None | None | None | N |
E/I | 0.275 | likely_benign | 0.2373 | benign | 0.078 | Stabilizing | 0.689 | D | 0.646 | neutral | None | None | None | None | N |
E/K | 0.185 | likely_benign | 0.1663 | benign | -0.372 | Destabilizing | 0.877 | D | 0.554 | neutral | D | 0.524975992 | None | None | N |
E/L | 0.3734 | ambiguous | 0.3353 | benign | 0.078 | Stabilizing | 0.014 | N | 0.419 | neutral | None | None | None | None | N |
E/M | 0.4381 | ambiguous | 0.3854 | ambiguous | 0.476 | Stabilizing | 0.735 | D | 0.717 | prob.delet. | None | None | None | None | N |
E/N | 0.2363 | likely_benign | 0.2045 | benign | -0.833 | Destabilizing | 0.783 | D | 0.593 | neutral | None | None | None | None | N |
E/P | 0.6392 | likely_pathogenic | 0.5941 | pathogenic | -0.198 | Destabilizing | 0.824 | D | 0.703 | prob.neutral | None | None | None | None | N |
E/Q | 0.1659 | likely_benign | 0.1525 | benign | -0.721 | Destabilizing | 0.973 | D | 0.58 | neutral | D | 0.522765193 | None | None | N |
E/R | 0.3625 | ambiguous | 0.3255 | benign | -0.097 | Destabilizing | 0.985 | D | 0.619 | neutral | None | None | None | None | N |
E/S | 0.2239 | likely_benign | 0.2002 | benign | -1.096 | Destabilizing | 0.836 | D | 0.547 | neutral | None | None | None | None | N |
E/T | 0.2093 | likely_benign | 0.1871 | benign | -0.82 | Destabilizing | 0.876 | D | 0.615 | neutral | None | None | None | None | N |
E/V | 0.1753 | likely_benign | 0.1519 | benign | -0.198 | Destabilizing | 0.031 | N | 0.372 | neutral | N | 0.500928483 | None | None | N |
E/W | 0.9139 | likely_pathogenic | 0.8773 | pathogenic | -0.053 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
E/Y | 0.6298 | likely_pathogenic | 0.5592 | ambiguous | -0.063 | Destabilizing | 0.998 | D | 0.724 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.