Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6839 | 20740;20741;20742 | chr2:178725807;178725806;178725805 | chr2:179590534;179590533;179590532 |
N2AB | 6522 | 19789;19790;19791 | chr2:178725807;178725806;178725805 | chr2:179590534;179590533;179590532 |
N2A | 5595 | 17008;17009;17010 | chr2:178725807;178725806;178725805 | chr2:179590534;179590533;179590532 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.673 | N | 0.567 | 0.294 | 0.398727352345 | gnomAD-4.0.0 | 1.60088E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.03638E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2829 | likely_benign | 0.2485 | benign | -0.398 | Destabilizing | 0.301 | N | 0.409 | neutral | N | 0.499906976 | None | None | I |
V/C | 0.9371 | likely_pathogenic | 0.9325 | pathogenic | -0.864 | Destabilizing | 1.0 | D | 0.65 | neutral | None | None | None | None | I |
V/D | 0.938 | likely_pathogenic | 0.9523 | pathogenic | -0.456 | Destabilizing | 0.999 | D | 0.691 | prob.neutral | None | None | None | None | I |
V/E | 0.8643 | likely_pathogenic | 0.8958 | pathogenic | -0.575 | Destabilizing | 0.989 | D | 0.659 | neutral | N | 0.489406221 | None | None | I |
V/F | 0.39 | ambiguous | 0.444 | ambiguous | -0.808 | Destabilizing | 0.999 | D | 0.653 | neutral | None | None | None | None | I |
V/G | 0.622 | likely_pathogenic | 0.5632 | ambiguous | -0.436 | Destabilizing | 0.997 | D | 0.62 | neutral | N | 0.496786053 | None | None | I |
V/H | 0.9435 | likely_pathogenic | 0.9574 | pathogenic | -0.042 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | I |
V/I | 0.1591 | likely_benign | 0.1609 | benign | -0.431 | Destabilizing | 0.847 | D | 0.525 | neutral | None | None | None | None | I |
V/K | 0.954 | likely_pathogenic | 0.9615 | pathogenic | -0.447 | Destabilizing | 0.996 | D | 0.661 | neutral | None | None | None | None | I |
V/L | 0.6691 | likely_pathogenic | 0.7194 | pathogenic | -0.431 | Destabilizing | 0.673 | D | 0.567 | neutral | N | 0.512086839 | None | None | I |
V/M | 0.4953 | ambiguous | 0.527 | ambiguous | -0.656 | Destabilizing | 0.999 | D | 0.664 | neutral | N | 0.499775021 | None | None | I |
V/N | 0.8466 | likely_pathogenic | 0.8651 | pathogenic | -0.25 | Destabilizing | 0.992 | D | 0.699 | prob.neutral | None | None | None | None | I |
V/P | 0.9819 | likely_pathogenic | 0.9831 | pathogenic | -0.395 | Destabilizing | 0.975 | D | 0.673 | neutral | None | None | None | None | I |
V/Q | 0.9078 | likely_pathogenic | 0.9302 | pathogenic | -0.466 | Destabilizing | 0.998 | D | 0.683 | prob.neutral | None | None | None | None | I |
V/R | 0.9027 | likely_pathogenic | 0.9202 | pathogenic | 0.005 | Stabilizing | 0.998 | D | 0.699 | prob.neutral | None | None | None | None | I |
V/S | 0.5798 | likely_pathogenic | 0.5658 | pathogenic | -0.546 | Destabilizing | 0.987 | D | 0.587 | neutral | None | None | None | None | I |
V/T | 0.4079 | ambiguous | 0.3817 | ambiguous | -0.58 | Destabilizing | 0.945 | D | 0.617 | neutral | None | None | None | None | I |
V/W | 0.9633 | likely_pathogenic | 0.9735 | pathogenic | -0.845 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | I |
V/Y | 0.842 | likely_pathogenic | 0.876 | pathogenic | -0.592 | Destabilizing | 0.999 | D | 0.66 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.