Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6840 | 20743;20744;20745 | chr2:178725804;178725803;178725802 | chr2:179590531;179590530;179590529 |
N2AB | 6523 | 19792;19793;19794 | chr2:178725804;178725803;178725802 | chr2:179590531;179590530;179590529 |
N2A | 5596 | 17011;17012;17013 | chr2:178725804;178725803;178725802 | chr2:179590531;179590530;179590529 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/R | None | None | 1.0 | D | 0.855 | 0.684 | 0.913998194909 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
G/V | rs1413034567 | None | 1.0 | D | 0.823 | 0.668 | 0.968543987747 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
G/V | rs1413034567 | None | 1.0 | D | 0.823 | 0.668 | 0.968543987747 | gnomAD-4.0.0 | 6.57462E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47076E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.7302 | likely_pathogenic | 0.8076 | pathogenic | -0.359 | Destabilizing | 1.0 | D | 0.74 | deleterious | D | 0.624058132 | None | None | I |
G/C | 0.9522 | likely_pathogenic | 0.9621 | pathogenic | -0.925 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
G/D | 0.9226 | likely_pathogenic | 0.9508 | pathogenic | -0.86 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | I |
G/E | 0.9638 | likely_pathogenic | 0.9809 | pathogenic | -1.036 | Destabilizing | 1.0 | D | 0.831 | deleterious | D | 0.619445199 | None | None | I |
G/F | 0.9873 | likely_pathogenic | 0.9914 | pathogenic | -1.137 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | I |
G/H | 0.9872 | likely_pathogenic | 0.9919 | pathogenic | -0.543 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | I |
G/I | 0.9871 | likely_pathogenic | 0.9917 | pathogenic | -0.561 | Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | I |
G/K | 0.9908 | likely_pathogenic | 0.9944 | pathogenic | -0.905 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | I |
G/L | 0.9835 | likely_pathogenic | 0.9882 | pathogenic | -0.561 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | I |
G/M | 0.9909 | likely_pathogenic | 0.9934 | pathogenic | -0.543 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | I |
G/N | 0.9626 | likely_pathogenic | 0.9743 | pathogenic | -0.549 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | I |
G/P | 0.9989 | likely_pathogenic | 0.9993 | pathogenic | -0.463 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | I |
G/Q | 0.9756 | likely_pathogenic | 0.985 | pathogenic | -0.885 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | I |
G/R | 0.9705 | likely_pathogenic | 0.9817 | pathogenic | -0.378 | Destabilizing | 1.0 | D | 0.855 | deleterious | D | 0.629569363 | None | None | I |
G/S | 0.6484 | likely_pathogenic | 0.7286 | pathogenic | -0.642 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | I |
G/T | 0.941 | likely_pathogenic | 0.9602 | pathogenic | -0.761 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | I |
G/V | 0.9716 | likely_pathogenic | 0.9821 | pathogenic | -0.463 | Destabilizing | 1.0 | D | 0.823 | deleterious | D | 0.662647466 | None | None | I |
G/W | 0.9812 | likely_pathogenic | 0.9875 | pathogenic | -1.254 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | I |
G/Y | 0.9805 | likely_pathogenic | 0.9874 | pathogenic | -0.932 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.