Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6841 | 20746;20747;20748 | chr2:178725801;178725800;178725799 | chr2:179590528;179590527;179590526 |
N2AB | 6524 | 19795;19796;19797 | chr2:178725801;178725800;178725799 | chr2:179590528;179590527;179590526 |
N2A | 5597 | 17014;17015;17016 | chr2:178725801;178725800;178725799 | chr2:179590528;179590527;179590526 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/I | rs769764362 | 0.049 | 0.771 | N | 0.539 | 0.396 | 0.63759658777 | gnomAD-2.1.1 | 8.15E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.8E-05 | 0 |
S/I | rs769764362 | 0.049 | 0.771 | N | 0.539 | 0.396 | 0.63759658777 | gnomAD-4.0.0 | 2.748E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.6103E-06 | 0 | 0 |
S/R | None | None | 0.49 | N | 0.427 | 0.276 | 0.28722502521 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0927 | likely_benign | 0.0981 | benign | -0.493 | Destabilizing | 0.01 | N | 0.307 | neutral | None | None | None | None | N |
S/C | 0.2075 | likely_benign | 0.1849 | benign | -0.37 | Destabilizing | 0.932 | D | 0.466 | neutral | D | 0.527754324 | None | None | N |
S/D | 0.6018 | likely_pathogenic | 0.6025 | pathogenic | -0.376 | Destabilizing | 0.405 | N | 0.267 | neutral | None | None | None | None | N |
S/E | 0.6357 | likely_pathogenic | 0.6636 | pathogenic | -0.463 | Destabilizing | 0.488 | N | 0.249 | neutral | None | None | None | None | N |
S/F | 0.1773 | likely_benign | 0.1731 | benign | -0.988 | Destabilizing | 0.817 | D | 0.55 | neutral | None | None | None | None | N |
S/G | 0.1343 | likely_benign | 0.1161 | benign | -0.627 | Destabilizing | 0.282 | N | 0.259 | neutral | D | 0.526740366 | None | None | N |
S/H | 0.4465 | ambiguous | 0.4255 | ambiguous | -1.142 | Destabilizing | 0.948 | D | 0.477 | neutral | None | None | None | None | N |
S/I | 0.192 | likely_benign | 0.1761 | benign | -0.261 | Destabilizing | 0.771 | D | 0.539 | neutral | N | 0.511371589 | None | None | N |
S/K | 0.7903 | likely_pathogenic | 0.789 | pathogenic | -0.704 | Destabilizing | 0.033 | N | 0.133 | neutral | None | None | None | None | N |
S/L | 0.1101 | likely_benign | 0.1127 | benign | -0.261 | Destabilizing | 0.56 | D | 0.511 | neutral | None | None | None | None | N |
S/M | 0.1969 | likely_benign | 0.1815 | benign | 0.137 | Stabilizing | 0.948 | D | 0.473 | neutral | None | None | None | None | N |
S/N | 0.1677 | likely_benign | 0.1492 | benign | -0.45 | Destabilizing | 0.057 | N | 0.285 | neutral | N | 0.497849237 | None | None | N |
S/P | 0.8198 | likely_pathogenic | 0.8767 | pathogenic | -0.309 | Destabilizing | 0.829 | D | 0.431 | neutral | None | None | None | None | N |
S/Q | 0.5809 | likely_pathogenic | 0.5793 | pathogenic | -0.785 | Destabilizing | 0.899 | D | 0.388 | neutral | None | None | None | None | N |
S/R | 0.72 | likely_pathogenic | 0.7087 | pathogenic | -0.389 | Destabilizing | 0.49 | N | 0.427 | neutral | N | 0.491088061 | None | None | N |
S/T | 0.0796 | likely_benign | 0.0828 | benign | -0.532 | Destabilizing | None | N | 0.105 | neutral | N | 0.499947048 | None | None | N |
S/V | 0.1969 | likely_benign | 0.1932 | benign | -0.309 | Destabilizing | 0.323 | N | 0.527 | neutral | None | None | None | None | N |
S/W | 0.3851 | ambiguous | 0.3906 | ambiguous | -0.95 | Destabilizing | 0.995 | D | 0.571 | neutral | None | None | None | None | N |
S/Y | 0.2108 | likely_benign | 0.2156 | benign | -0.702 | Destabilizing | 0.033 | N | 0.415 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.