Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6844 | 20755;20756;20757 | chr2:178725792;178725791;178725790 | chr2:179590519;179590518;179590517 |
N2AB | 6527 | 19804;19805;19806 | chr2:178725792;178725791;178725790 | chr2:179590519;179590518;179590517 |
N2A | 5600 | 17023;17024;17025 | chr2:178725792;178725791;178725790 | chr2:179590519;179590518;179590517 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/W | None | None | 1.0 | N | 0.745 | 0.486 | 0.716924671941 | gnomAD-4.0.0 | 1.61345E-06 | None | None | None | None | N | None | 0 | 2.31932E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.5201 | ambiguous | 0.4203 | ambiguous | -2.445 | Highly Destabilizing | 0.926 | D | 0.511 | neutral | None | None | None | None | N |
C/D | 0.9576 | likely_pathogenic | 0.9426 | pathogenic | -1.341 | Destabilizing | 0.964 | D | 0.801 | deleterious | None | None | None | None | N |
C/E | 0.9712 | likely_pathogenic | 0.9641 | pathogenic | -1.166 | Destabilizing | 0.997 | D | 0.807 | deleterious | None | None | None | None | N |
C/F | 0.5027 | ambiguous | 0.4577 | ambiguous | -1.564 | Destabilizing | 1.0 | D | 0.798 | deleterious | N | 0.503240834 | None | None | N |
C/G | 0.414 | ambiguous | 0.3515 | ambiguous | -2.787 | Highly Destabilizing | 0.971 | D | 0.779 | deleterious | D | 0.532827471 | None | None | N |
C/H | 0.8467 | likely_pathogenic | 0.8023 | pathogenic | -2.543 | Highly Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
C/I | 0.7356 | likely_pathogenic | 0.6894 | pathogenic | -1.504 | Destabilizing | 0.999 | D | 0.806 | deleterious | None | None | None | None | N |
C/K | 0.9513 | likely_pathogenic | 0.9375 | pathogenic | -1.753 | Destabilizing | 0.995 | D | 0.799 | deleterious | None | None | None | None | N |
C/L | 0.6898 | likely_pathogenic | 0.6565 | pathogenic | -1.504 | Destabilizing | 0.995 | D | 0.756 | deleterious | None | None | None | None | N |
C/M | 0.8028 | likely_pathogenic | 0.766 | pathogenic | 0.044 | Stabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | N |
C/N | 0.8829 | likely_pathogenic | 0.8163 | pathogenic | -1.99 | Destabilizing | 0.995 | D | 0.805 | deleterious | None | None | None | None | N |
C/P | 0.9944 | likely_pathogenic | 0.9953 | pathogenic | -1.798 | Destabilizing | 0.995 | D | 0.812 | deleterious | None | None | None | None | N |
C/Q | 0.908 | likely_pathogenic | 0.8732 | pathogenic | -1.734 | Destabilizing | 0.998 | D | 0.821 | deleterious | None | None | None | None | N |
C/R | 0.7577 | likely_pathogenic | 0.7202 | pathogenic | -1.655 | Destabilizing | 0.999 | D | 0.815 | deleterious | D | 0.530691243 | None | None | N |
C/S | 0.5433 | ambiguous | 0.3726 | ambiguous | -2.522 | Highly Destabilizing | 0.428 | N | 0.423 | neutral | N | 0.474989888 | None | None | N |
C/T | 0.7097 | likely_pathogenic | 0.5705 | pathogenic | -2.172 | Highly Destabilizing | 0.438 | N | 0.444 | neutral | None | None | None | None | N |
C/V | 0.6162 | likely_pathogenic | 0.5503 | ambiguous | -1.798 | Destabilizing | 0.988 | D | 0.769 | deleterious | None | None | None | None | N |
C/W | 0.8574 | likely_pathogenic | 0.8404 | pathogenic | -1.634 | Destabilizing | 1.0 | D | 0.745 | deleterious | N | 0.515357608 | None | None | N |
C/Y | 0.7009 | likely_pathogenic | 0.6759 | pathogenic | -1.689 | Destabilizing | 1.0 | D | 0.775 | deleterious | D | 0.526371518 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.