Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6848 | 20767;20768;20769 | chr2:178725780;178725779;178725778 | chr2:179590507;179590506;179590505 |
N2AB | 6531 | 19816;19817;19818 | chr2:178725780;178725779;178725778 | chr2:179590507;179590506;179590505 |
N2A | 5604 | 17035;17036;17037 | chr2:178725780;178725779;178725778 | chr2:179590507;179590506;179590505 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1413547257 | -0.177 | 0.001 | N | 0.249 | 0.098 | 0.247872288689 | gnomAD-4.0.0 | 1.39113E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.89251E-05 | 1.77431E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6621 | likely_pathogenic | 0.7139 | pathogenic | -2.283 | Highly Destabilizing | 0.296 | N | 0.642 | neutral | D | 0.548911813 | None | None | N |
V/C | 0.9258 | likely_pathogenic | 0.9317 | pathogenic | -1.812 | Destabilizing | 0.991 | D | 0.805 | deleterious | None | None | None | None | N |
V/D | 0.9873 | likely_pathogenic | 0.9917 | pathogenic | -3.061 | Highly Destabilizing | 0.906 | D | 0.863 | deleterious | None | None | None | None | N |
V/E | 0.96 | likely_pathogenic | 0.9708 | pathogenic | -2.766 | Highly Destabilizing | 0.957 | D | 0.827 | deleterious | D | 0.586693931 | None | None | N |
V/F | 0.3795 | ambiguous | 0.4042 | ambiguous | -1.316 | Destabilizing | 0.826 | D | 0.799 | deleterious | None | None | None | None | N |
V/G | 0.8394 | likely_pathogenic | 0.8742 | pathogenic | -2.897 | Highly Destabilizing | 0.879 | D | 0.83 | deleterious | D | 0.586693931 | None | None | N |
V/H | 0.9802 | likely_pathogenic | 0.9821 | pathogenic | -2.733 | Highly Destabilizing | 0.991 | D | 0.849 | deleterious | None | None | None | None | N |
V/I | 0.068 | likely_benign | 0.0672 | benign | -0.523 | Destabilizing | 0.001 | N | 0.249 | neutral | N | 0.499918123 | None | None | N |
V/K | 0.9652 | likely_pathogenic | 0.9727 | pathogenic | -1.994 | Destabilizing | 0.906 | D | 0.821 | deleterious | None | None | None | None | N |
V/L | 0.1768 | likely_benign | 0.1788 | benign | -0.523 | Destabilizing | 0.001 | N | 0.273 | neutral | N | 0.413759711 | None | None | N |
V/M | 0.2291 | likely_benign | 0.2571 | benign | -0.655 | Destabilizing | 0.826 | D | 0.711 | prob.delet. | None | None | None | None | N |
V/N | 0.9524 | likely_pathogenic | 0.9639 | pathogenic | -2.549 | Highly Destabilizing | 0.967 | D | 0.856 | deleterious | None | None | None | None | N |
V/P | 0.9649 | likely_pathogenic | 0.9736 | pathogenic | -1.086 | Destabilizing | 0.967 | D | 0.841 | deleterious | None | None | None | None | N |
V/Q | 0.947 | likely_pathogenic | 0.9587 | pathogenic | -2.246 | Highly Destabilizing | 0.967 | D | 0.831 | deleterious | None | None | None | None | N |
V/R | 0.9481 | likely_pathogenic | 0.9614 | pathogenic | -1.983 | Destabilizing | 0.906 | D | 0.857 | deleterious | None | None | None | None | N |
V/S | 0.8859 | likely_pathogenic | 0.9133 | pathogenic | -3.16 | Highly Destabilizing | 0.906 | D | 0.802 | deleterious | None | None | None | None | N |
V/T | 0.7456 | likely_pathogenic | 0.7969 | pathogenic | -2.7 | Highly Destabilizing | 0.575 | D | 0.649 | neutral | None | None | None | None | N |
V/W | 0.9675 | likely_pathogenic | 0.9711 | pathogenic | -1.901 | Destabilizing | 0.991 | D | 0.851 | deleterious | None | None | None | None | N |
V/Y | 0.9018 | likely_pathogenic | 0.9155 | pathogenic | -1.511 | Destabilizing | 0.906 | D | 0.812 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.