Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC685020773;20774;20775 chr2:178725774;178725773;178725772chr2:179590501;179590500;179590499
N2AB653319822;19823;19824 chr2:178725774;178725773;178725772chr2:179590501;179590500;179590499
N2A560617041;17042;17043 chr2:178725774;178725773;178725772chr2:179590501;179590500;179590499
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: TTG
  • RefSeq wild type template codon: AAC
  • Domain: Ig-52
  • Domain position: 90
  • Structural Position: 177
  • Q(SASA): 1.0369
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/F None None 1.0 N 0.671 0.393 0.32714864917 gnomAD-4.0.0 1.66516E-06 None None None None I None 0 0 None 0 0 None 0 0 2.98836E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.3749 ambiguous 0.3731 ambiguous -1.321 Destabilizing 1.0 D 0.608 neutral None None None None I
L/C 0.5662 likely_pathogenic 0.5806 pathogenic -0.844 Destabilizing 1.0 D 0.691 prob.neutral None None None None I
L/D 0.8287 likely_pathogenic 0.8338 pathogenic -0.643 Destabilizing 1.0 D 0.723 prob.delet. None None None None I
L/E 0.4546 ambiguous 0.4672 ambiguous -0.642 Destabilizing 1.0 D 0.715 prob.delet. None None None None I
L/F 0.1324 likely_benign 0.1344 benign -0.814 Destabilizing 1.0 D 0.671 neutral N 0.491989287 None None I
L/G 0.6401 likely_pathogenic 0.6221 pathogenic -1.626 Destabilizing 1.0 D 0.705 prob.neutral None None None None I
L/H 0.3056 likely_benign 0.3189 benign -0.739 Destabilizing 1.0 D 0.752 deleterious None None None None I
L/I 0.1139 likely_benign 0.1119 benign -0.57 Destabilizing 0.563 D 0.329 neutral None None None None I
L/K 0.325 likely_benign 0.3562 ambiguous -0.955 Destabilizing 0.999 D 0.669 neutral None None None None I
L/M 0.0928 likely_benign 0.0974 benign -0.532 Destabilizing 0.999 D 0.656 neutral D 0.535876137 None None I
L/N 0.5406 ambiguous 0.5392 ambiguous -0.795 Destabilizing 1.0 D 0.725 prob.delet. None None None None I
L/P 0.4325 ambiguous 0.421 ambiguous -0.788 Destabilizing 1.0 D 0.725 prob.delet. None None None None I
L/Q 0.1679 likely_benign 0.1735 benign -0.932 Destabilizing 1.0 D 0.696 prob.neutral None None None None I
L/R 0.2564 likely_benign 0.2825 benign -0.388 Destabilizing 1.0 D 0.696 prob.neutral None None None None I
L/S 0.4623 ambiguous 0.4548 ambiguous -1.39 Destabilizing 1.0 D 0.659 neutral N 0.511431858 None None I
L/T 0.3745 ambiguous 0.3643 ambiguous -1.269 Destabilizing 1.0 D 0.637 neutral None None None None I
L/V 0.1223 likely_benign 0.1201 benign -0.788 Destabilizing 0.895 D 0.577 neutral N 0.451262093 None None I
L/W 0.2061 likely_benign 0.2047 benign -0.879 Destabilizing 1.0 D 0.748 deleterious N 0.511938837 None None I
L/Y 0.3147 likely_benign 0.3168 benign -0.66 Destabilizing 0.999 D 0.692 prob.neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.