Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6850 | 20773;20774;20775 | chr2:178725774;178725773;178725772 | chr2:179590501;179590500;179590499 |
N2AB | 6533 | 19822;19823;19824 | chr2:178725774;178725773;178725772 | chr2:179590501;179590500;179590499 |
N2A | 5606 | 17041;17042;17043 | chr2:178725774;178725773;178725772 | chr2:179590501;179590500;179590499 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 1.0 | N | 0.671 | 0.393 | 0.32714864917 | gnomAD-4.0.0 | 1.66516E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.98836E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.3749 | ambiguous | 0.3731 | ambiguous | -1.321 | Destabilizing | 1.0 | D | 0.608 | neutral | None | None | None | None | I |
L/C | 0.5662 | likely_pathogenic | 0.5806 | pathogenic | -0.844 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | I |
L/D | 0.8287 | likely_pathogenic | 0.8338 | pathogenic | -0.643 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | I |
L/E | 0.4546 | ambiguous | 0.4672 | ambiguous | -0.642 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | I |
L/F | 0.1324 | likely_benign | 0.1344 | benign | -0.814 | Destabilizing | 1.0 | D | 0.671 | neutral | N | 0.491989287 | None | None | I |
L/G | 0.6401 | likely_pathogenic | 0.6221 | pathogenic | -1.626 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | I |
L/H | 0.3056 | likely_benign | 0.3189 | benign | -0.739 | Destabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | I |
L/I | 0.1139 | likely_benign | 0.1119 | benign | -0.57 | Destabilizing | 0.563 | D | 0.329 | neutral | None | None | None | None | I |
L/K | 0.325 | likely_benign | 0.3562 | ambiguous | -0.955 | Destabilizing | 0.999 | D | 0.669 | neutral | None | None | None | None | I |
L/M | 0.0928 | likely_benign | 0.0974 | benign | -0.532 | Destabilizing | 0.999 | D | 0.656 | neutral | D | 0.535876137 | None | None | I |
L/N | 0.5406 | ambiguous | 0.5392 | ambiguous | -0.795 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | I |
L/P | 0.4325 | ambiguous | 0.421 | ambiguous | -0.788 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | I |
L/Q | 0.1679 | likely_benign | 0.1735 | benign | -0.932 | Destabilizing | 1.0 | D | 0.696 | prob.neutral | None | None | None | None | I |
L/R | 0.2564 | likely_benign | 0.2825 | benign | -0.388 | Destabilizing | 1.0 | D | 0.696 | prob.neutral | None | None | None | None | I |
L/S | 0.4623 | ambiguous | 0.4548 | ambiguous | -1.39 | Destabilizing | 1.0 | D | 0.659 | neutral | N | 0.511431858 | None | None | I |
L/T | 0.3745 | ambiguous | 0.3643 | ambiguous | -1.269 | Destabilizing | 1.0 | D | 0.637 | neutral | None | None | None | None | I |
L/V | 0.1223 | likely_benign | 0.1201 | benign | -0.788 | Destabilizing | 0.895 | D | 0.577 | neutral | N | 0.451262093 | None | None | I |
L/W | 0.2061 | likely_benign | 0.2047 | benign | -0.879 | Destabilizing | 1.0 | D | 0.748 | deleterious | N | 0.511938837 | None | None | I |
L/Y | 0.3147 | likely_benign | 0.3168 | benign | -0.66 | Destabilizing | 0.999 | D | 0.692 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.