Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6861 | 20806;20807;20808 | chr2:178725623;178725622;178725621 | chr2:179590350;179590349;179590348 |
N2AB | 6544 | 19855;19856;19857 | chr2:178725623;178725622;178725621 | chr2:179590350;179590349;179590348 |
N2A | 5617 | 17074;17075;17076 | chr2:178725623;178725622;178725621 | chr2:179590350;179590349;179590348 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/H | rs2079209158 | None | 0.295 | N | 0.329 | 0.167 | 0.210429274316 | gnomAD-4.0.0 | 1.6431E-06 | None | None | None | None | I | None | 5.91506E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
N/K | rs760063480 | None | 0.012 | N | 0.227 | 0.123 | 0.158396225186 | gnomAD-4.0.0 | 6.94043E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.08171E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1553 | likely_benign | 0.1257 | benign | -0.22 | Destabilizing | 0.016 | N | 0.329 | neutral | None | None | None | None | I |
N/C | 0.2621 | likely_benign | 0.2059 | benign | 0.29 | Stabilizing | 0.676 | D | 0.371 | neutral | None | None | None | None | I |
N/D | 0.1074 | likely_benign | 0.1016 | benign | 0.322 | Stabilizing | None | N | 0.07 | neutral | N | 0.363072679 | None | None | I |
N/E | 0.2252 | likely_benign | 0.2046 | benign | 0.281 | Stabilizing | 0.001 | N | 0.081 | neutral | None | None | None | None | I |
N/F | 0.4092 | ambiguous | 0.3368 | benign | -0.682 | Destabilizing | 0.356 | N | 0.412 | neutral | None | None | None | None | I |
N/G | 0.1855 | likely_benign | 0.1561 | benign | -0.366 | Destabilizing | 0.016 | N | 0.225 | neutral | None | None | None | None | I |
N/H | 0.0775 | likely_benign | 0.0717 | benign | -0.392 | Destabilizing | 0.295 | N | 0.329 | neutral | N | 0.393395586 | None | None | I |
N/I | 0.1718 | likely_benign | 0.1423 | benign | 0.07 | Stabilizing | 0.029 | N | 0.449 | neutral | N | 0.38279459 | None | None | I |
N/K | 0.1479 | likely_benign | 0.139 | benign | 0.245 | Stabilizing | 0.012 | N | 0.227 | neutral | N | 0.362376459 | None | None | I |
N/L | 0.1865 | likely_benign | 0.1562 | benign | 0.07 | Stabilizing | 0.016 | N | 0.419 | neutral | None | None | None | None | I |
N/M | 0.2925 | likely_benign | 0.2502 | benign | 0.285 | Stabilizing | 0.356 | N | 0.383 | neutral | None | None | None | None | I |
N/P | 0.305 | likely_benign | 0.2371 | benign | -0.001 | Destabilizing | 0.072 | N | 0.418 | neutral | None | None | None | None | I |
N/Q | 0.1803 | likely_benign | 0.1573 | benign | -0.226 | Destabilizing | 0.072 | N | 0.267 | neutral | None | None | None | None | I |
N/R | 0.1663 | likely_benign | 0.1583 | benign | 0.261 | Stabilizing | 0.072 | N | 0.27 | neutral | None | None | None | None | I |
N/S | 0.0682 | likely_benign | 0.0628 | benign | -0.03 | Destabilizing | None | N | 0.087 | neutral | N | 0.262196396 | None | None | I |
N/T | 0.0974 | likely_benign | 0.0842 | benign | 0.073 | Stabilizing | None | N | 0.081 | neutral | N | 0.370884086 | None | None | I |
N/V | 0.1838 | likely_benign | 0.1502 | benign | -0.001 | Destabilizing | 0.001 | N | 0.229 | neutral | None | None | None | None | I |
N/W | 0.6268 | likely_pathogenic | 0.5847 | pathogenic | -0.705 | Destabilizing | 0.864 | D | 0.393 | neutral | None | None | None | None | I |
N/Y | 0.1299 | likely_benign | 0.1165 | benign | -0.403 | Destabilizing | 0.295 | N | 0.401 | neutral | N | 0.412597422 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.