Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6869 | 20830;20831;20832 | chr2:178725599;178725598;178725597 | chr2:179590326;179590325;179590324 |
N2AB | 6552 | 19879;19880;19881 | chr2:178725599;178725598;178725597 | chr2:179590326;179590325;179590324 |
N2A | 5625 | 17098;17099;17100 | chr2:178725599;178725598;178725597 | chr2:179590326;179590325;179590324 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs746830456 | 0.645 | 0.379 | N | 0.369 | 0.116 | 0.166414681773 | gnomAD-2.1.1 | 1.22E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.8E-05 | 1.68577E-04 |
E/K | rs746830456 | 0.645 | 0.379 | N | 0.369 | 0.116 | 0.166414681773 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs746830456 | 0.645 | 0.379 | N | 0.369 | 0.116 | 0.166414681773 | gnomAD-4.0.0 | 7.45328E-06 | None | None | None | None | I | None | 1.33804E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 8.48915E-06 | 1.10725E-05 | 0 |
E/Q | rs746830456 | None | 0.099 | N | 0.343 | 0.079 | 0.0846915920261 | gnomAD-4.0.0 | 6.85897E-07 | None | None | None | None | I | None | 3.00192E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1493 | likely_benign | 0.126 | benign | -0.551 | Destabilizing | 0.549 | D | 0.298 | neutral | N | 0.491348101 | None | None | I |
E/C | 0.7782 | likely_pathogenic | 0.7477 | pathogenic | -0.229 | Destabilizing | 0.992 | D | 0.499 | neutral | None | None | None | None | I |
E/D | 0.1099 | likely_benign | 0.0961 | benign | -0.573 | Destabilizing | 0.004 | N | 0.333 | neutral | N | 0.443337964 | None | None | I |
E/F | 0.5901 | likely_pathogenic | 0.5244 | ambiguous | -0.275 | Destabilizing | 0.85 | D | 0.44 | neutral | None | None | None | None | I |
E/G | 0.1332 | likely_benign | 0.1196 | benign | -0.793 | Destabilizing | 0.004 | N | 0.281 | neutral | N | 0.50829352 | None | None | I |
E/H | 0.3292 | likely_benign | 0.312 | benign | -0.101 | Destabilizing | 0.92 | D | 0.314 | neutral | None | None | None | None | I |
E/I | 0.2889 | likely_benign | 0.2368 | benign | 0.068 | Stabilizing | 0.92 | D | 0.437 | neutral | None | None | None | None | I |
E/K | 0.0851 | likely_benign | 0.0871 | benign | 0.063 | Stabilizing | 0.379 | N | 0.369 | neutral | N | 0.493382782 | None | None | I |
E/L | 0.28 | likely_benign | 0.2396 | benign | 0.068 | Stabilizing | 0.85 | D | 0.42 | neutral | None | None | None | None | I |
E/M | 0.3079 | likely_benign | 0.2686 | benign | 0.186 | Stabilizing | 0.992 | D | 0.421 | neutral | None | None | None | None | I |
E/N | 0.1713 | likely_benign | 0.1406 | benign | -0.35 | Destabilizing | 0.447 | N | 0.338 | neutral | None | None | None | None | I |
E/P | 0.7662 | likely_pathogenic | 0.7661 | pathogenic | -0.118 | Destabilizing | 0.92 | D | 0.337 | neutral | None | None | None | None | I |
E/Q | 0.0939 | likely_benign | 0.0907 | benign | -0.298 | Destabilizing | 0.099 | N | 0.343 | neutral | N | 0.461078363 | None | None | I |
E/R | 0.1655 | likely_benign | 0.173 | benign | 0.358 | Stabilizing | 0.85 | D | 0.339 | neutral | None | None | None | None | I |
E/S | 0.1556 | likely_benign | 0.132 | benign | -0.525 | Destabilizing | 0.447 | N | 0.309 | neutral | None | None | None | None | I |
E/T | 0.1906 | likely_benign | 0.1585 | benign | -0.329 | Destabilizing | 0.617 | D | 0.325 | neutral | None | None | None | None | I |
E/V | 0.1808 | likely_benign | 0.1536 | benign | -0.118 | Destabilizing | 0.896 | D | 0.411 | neutral | N | 0.481094659 | None | None | I |
E/W | 0.8086 | likely_pathogenic | 0.8069 | pathogenic | -0.066 | Destabilizing | 0.026 | N | 0.414 | neutral | None | None | None | None | I |
E/Y | 0.4366 | ambiguous | 0.4011 | ambiguous | -0.024 | Destabilizing | 0.85 | D | 0.421 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.