Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6870 | 20833;20834;20835 | chr2:178725596;178725595;178725594 | chr2:179590323;179590322;179590321 |
N2AB | 6553 | 19882;19883;19884 | chr2:178725596;178725595;178725594 | chr2:179590323;179590322;179590321 |
N2A | 5626 | 17101;17102;17103 | chr2:178725596;178725595;178725594 | chr2:179590323;179590322;179590321 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | None | None | 0.454 | N | 0.369 | 0.1 | 0.130388298395 | gnomAD-4.0.0 | 1.59995E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87249E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0626 | likely_benign | 0.0591 | benign | -0.722 | Destabilizing | 0.454 | N | 0.369 | neutral | N | 0.470561851 | None | None | N |
P/C | 0.4434 | ambiguous | 0.3928 | ambiguous | -0.591 | Destabilizing | 0.998 | D | 0.377 | neutral | None | None | None | None | N |
P/D | 0.2742 | likely_benign | 0.2443 | benign | -0.696 | Destabilizing | 0.728 | D | 0.349 | neutral | None | None | None | None | N |
P/E | 0.1877 | likely_benign | 0.1703 | benign | -0.806 | Destabilizing | 0.067 | N | 0.201 | neutral | None | None | None | None | N |
P/F | 0.3151 | likely_benign | 0.2621 | benign | -0.853 | Destabilizing | 0.974 | D | 0.387 | neutral | None | None | None | None | N |
P/G | 0.2265 | likely_benign | 0.198 | benign | -0.889 | Destabilizing | 0.728 | D | 0.357 | neutral | None | None | None | None | N |
P/H | 0.1493 | likely_benign | 0.1351 | benign | -0.41 | Destabilizing | 0.028 | N | 0.264 | neutral | N | 0.462871364 | None | None | N |
P/I | 0.218 | likely_benign | 0.1816 | benign | -0.42 | Destabilizing | 0.974 | D | 0.405 | neutral | None | None | None | None | N |
P/K | 0.1727 | likely_benign | 0.1575 | benign | -0.663 | Destabilizing | 0.525 | D | 0.345 | neutral | None | None | None | None | N |
P/L | 0.0925 | likely_benign | 0.0835 | benign | -0.42 | Destabilizing | 0.801 | D | 0.389 | neutral | N | 0.508080089 | None | None | N |
P/M | 0.2126 | likely_benign | 0.185 | benign | -0.327 | Destabilizing | 0.991 | D | 0.347 | neutral | None | None | None | None | N |
P/N | 0.2119 | likely_benign | 0.1831 | benign | -0.337 | Destabilizing | 0.842 | D | 0.347 | neutral | None | None | None | None | N |
P/Q | 0.1207 | likely_benign | 0.1111 | benign | -0.633 | Destabilizing | 0.172 | N | 0.193 | neutral | None | None | None | None | N |
P/R | 0.1201 | likely_benign | 0.1139 | benign | -0.04 | Destabilizing | 0.801 | D | 0.378 | neutral | N | 0.491667842 | None | None | N |
P/S | 0.0972 | likely_benign | 0.09 | benign | -0.692 | Destabilizing | 0.051 | N | 0.191 | neutral | N | 0.437254567 | None | None | N |
P/T | 0.0751 | likely_benign | 0.0719 | benign | -0.708 | Destabilizing | 0.669 | D | 0.353 | neutral | N | 0.433387542 | None | None | N |
P/V | 0.1521 | likely_benign | 0.1307 | benign | -0.485 | Destabilizing | 0.842 | D | 0.381 | neutral | None | None | None | None | N |
P/W | 0.4596 | ambiguous | 0.4106 | ambiguous | -0.924 | Destabilizing | 0.998 | D | 0.441 | neutral | None | None | None | None | N |
P/Y | 0.3032 | likely_benign | 0.2665 | benign | -0.645 | Destabilizing | 0.949 | D | 0.409 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.