Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6872 | 20839;20840;20841 | chr2:178725590;178725589;178725588 | chr2:179590317;179590316;179590315 |
N2AB | 6555 | 19888;19889;19890 | chr2:178725590;178725589;178725588 | chr2:179590317;179590316;179590315 |
N2A | 5628 | 17107;17108;17109 | chr2:178725590;178725589;178725588 | chr2:179590317;179590316;179590315 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs376378443 | 0.114 | 0.134 | N | 0.288 | 0.194 | None | gnomAD-2.1.1 | 1.8E-05 | None | None | None | None | N | None | 2.07142E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/K | rs376378443 | 0.114 | 0.134 | N | 0.288 | 0.194 | None | gnomAD-3.1.2 | 5.92E-05 | None | None | None | None | N | None | 2.17192E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs376378443 | 0.114 | 0.134 | N | 0.288 | 0.194 | None | gnomAD-4.0.0 | 8.06738E-06 | None | None | None | None | N | None | 1.60466E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.60395E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1354 | likely_benign | 0.1129 | benign | -0.728 | Destabilizing | 0.704 | D | 0.485 | neutral | N | 0.460691574 | None | None | N |
E/C | 0.8033 | likely_pathogenic | 0.7434 | pathogenic | -0.405 | Destabilizing | 0.999 | D | 0.559 | neutral | None | None | None | None | N |
E/D | 0.3177 | likely_benign | 0.2272 | benign | -0.957 | Destabilizing | 0.92 | D | 0.581 | neutral | N | 0.499729965 | None | None | N |
E/F | 0.6111 | likely_pathogenic | 0.5175 | ambiguous | -0.206 | Destabilizing | 0.991 | D | 0.591 | neutral | None | None | None | None | N |
E/G | 0.23 | likely_benign | 0.1835 | benign | -1.063 | Destabilizing | 0.92 | D | 0.574 | neutral | N | 0.469036656 | None | None | N |
E/H | 0.42 | ambiguous | 0.3282 | benign | -0.353 | Destabilizing | 0.997 | D | 0.564 | neutral | None | None | None | None | N |
E/I | 0.2214 | likely_benign | 0.1794 | benign | 0.172 | Stabilizing | 0.17 | N | 0.463 | neutral | None | None | None | None | N |
E/K | 0.1166 | likely_benign | 0.1045 | benign | -0.356 | Destabilizing | 0.134 | N | 0.288 | neutral | N | 0.450127864 | None | None | N |
E/L | 0.293 | likely_benign | 0.2376 | benign | 0.172 | Stabilizing | 0.759 | D | 0.529 | neutral | None | None | None | None | N |
E/M | 0.3192 | likely_benign | 0.2674 | benign | 0.462 | Stabilizing | 0.991 | D | 0.562 | neutral | None | None | None | None | N |
E/N | 0.3476 | ambiguous | 0.2549 | benign | -0.861 | Destabilizing | 0.939 | D | 0.539 | neutral | None | None | None | None | N |
E/P | 0.9195 | likely_pathogenic | 0.9005 | pathogenic | -0.107 | Destabilizing | 0.991 | D | 0.606 | neutral | None | None | None | None | N |
E/Q | 0.1048 | likely_benign | 0.0905 | benign | -0.745 | Destabilizing | 0.92 | D | 0.527 | neutral | N | 0.421095823 | None | None | N |
E/R | 0.2072 | likely_benign | 0.1799 | benign | -0.058 | Destabilizing | 0.884 | D | 0.542 | neutral | None | None | None | None | N |
E/S | 0.2025 | likely_benign | 0.1542 | benign | -1.108 | Destabilizing | 0.373 | N | 0.278 | neutral | None | None | None | None | N |
E/T | 0.1575 | likely_benign | 0.1307 | benign | -0.83 | Destabilizing | 0.884 | D | 0.601 | neutral | None | None | None | None | N |
E/V | 0.1262 | likely_benign | 0.1094 | benign | -0.107 | Destabilizing | 0.134 | N | 0.392 | neutral | N | 0.445855407 | None | None | N |
E/W | 0.8619 | likely_pathogenic | 0.8105 | pathogenic | 0.053 | Stabilizing | 0.999 | D | 0.601 | neutral | None | None | None | None | N |
E/Y | 0.5536 | ambiguous | 0.4655 | ambiguous | 0.052 | Stabilizing | 0.997 | D | 0.577 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.