Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC687220839;20840;20841 chr2:178725590;178725589;178725588chr2:179590317;179590316;179590315
N2AB655519888;19889;19890 chr2:178725590;178725589;178725588chr2:179590317;179590316;179590315
N2A562817107;17108;17109 chr2:178725590;178725589;178725588chr2:179590317;179590316;179590315
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: E
  • RefSeq wild type transcript codon: GAA
  • RefSeq wild type template codon: CTT
  • Domain: Ig-53
  • Domain position: 19
  • Structural Position: 29
  • Q(SASA): 0.5811
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
E/K rs376378443 0.114 0.134 N 0.288 0.194 None gnomAD-2.1.1 1.8E-05 None None None None N None 2.07142E-04 0 None 0 0 None 0 None 0 0 0
E/K rs376378443 0.114 0.134 N 0.288 0.194 None gnomAD-3.1.2 5.92E-05 None None None None N None 2.17192E-04 0 0 0 0 None 0 0 0 0 0
E/K rs376378443 0.114 0.134 N 0.288 0.194 None gnomAD-4.0.0 8.06738E-06 None None None None N None 1.60466E-04 0 None 0 0 None 0 0 0 0 1.60395E-05

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
E/A 0.1354 likely_benign 0.1129 benign -0.728 Destabilizing 0.704 D 0.485 neutral N 0.460691574 None None N
E/C 0.8033 likely_pathogenic 0.7434 pathogenic -0.405 Destabilizing 0.999 D 0.559 neutral None None None None N
E/D 0.3177 likely_benign 0.2272 benign -0.957 Destabilizing 0.92 D 0.581 neutral N 0.499729965 None None N
E/F 0.6111 likely_pathogenic 0.5175 ambiguous -0.206 Destabilizing 0.991 D 0.591 neutral None None None None N
E/G 0.23 likely_benign 0.1835 benign -1.063 Destabilizing 0.92 D 0.574 neutral N 0.469036656 None None N
E/H 0.42 ambiguous 0.3282 benign -0.353 Destabilizing 0.997 D 0.564 neutral None None None None N
E/I 0.2214 likely_benign 0.1794 benign 0.172 Stabilizing 0.17 N 0.463 neutral None None None None N
E/K 0.1166 likely_benign 0.1045 benign -0.356 Destabilizing 0.134 N 0.288 neutral N 0.450127864 None None N
E/L 0.293 likely_benign 0.2376 benign 0.172 Stabilizing 0.759 D 0.529 neutral None None None None N
E/M 0.3192 likely_benign 0.2674 benign 0.462 Stabilizing 0.991 D 0.562 neutral None None None None N
E/N 0.3476 ambiguous 0.2549 benign -0.861 Destabilizing 0.939 D 0.539 neutral None None None None N
E/P 0.9195 likely_pathogenic 0.9005 pathogenic -0.107 Destabilizing 0.991 D 0.606 neutral None None None None N
E/Q 0.1048 likely_benign 0.0905 benign -0.745 Destabilizing 0.92 D 0.527 neutral N 0.421095823 None None N
E/R 0.2072 likely_benign 0.1799 benign -0.058 Destabilizing 0.884 D 0.542 neutral None None None None N
E/S 0.2025 likely_benign 0.1542 benign -1.108 Destabilizing 0.373 N 0.278 neutral None None None None N
E/T 0.1575 likely_benign 0.1307 benign -0.83 Destabilizing 0.884 D 0.601 neutral None None None None N
E/V 0.1262 likely_benign 0.1094 benign -0.107 Destabilizing 0.134 N 0.392 neutral N 0.445855407 None None N
E/W 0.8619 likely_pathogenic 0.8105 pathogenic 0.053 Stabilizing 0.999 D 0.601 neutral None None None None N
E/Y 0.5536 ambiguous 0.4655 ambiguous 0.052 Stabilizing 0.997 D 0.577 neutral None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.