Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6876 | 20851;20852;20853 | chr2:178725578;178725577;178725576 | chr2:179590305;179590304;179590303 |
N2AB | 6559 | 19900;19901;19902 | chr2:178725578;178725577;178725576 | chr2:179590305;179590304;179590303 |
N2A | 5632 | 17119;17120;17121 | chr2:178725578;178725577;178725576 | chr2:179590305;179590304;179590303 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/T | rs1359024577 | -0.599 | None | N | 0.134 | 0.101 | 0.0551355673512 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.94E-06 | 0 |
S/T | rs1359024577 | -0.599 | None | N | 0.134 | 0.101 | 0.0551355673512 | gnomAD-4.0.0 | 4.1089E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.39967E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0665 | likely_benign | 0.0643 | benign | -0.851 | Destabilizing | 0.001 | N | 0.354 | neutral | N | 0.409210401 | None | None | N |
S/C | 0.1058 | likely_benign | 0.1024 | benign | -0.65 | Destabilizing | 0.196 | N | 0.506 | neutral | N | 0.494002511 | None | None | N |
S/D | 0.2377 | likely_benign | 0.2253 | benign | -0.254 | Destabilizing | 0.044 | N | 0.386 | neutral | None | None | None | None | N |
S/E | 0.2526 | likely_benign | 0.2509 | benign | -0.252 | Destabilizing | 0.018 | N | 0.367 | neutral | None | None | None | None | N |
S/F | 0.1218 | likely_benign | 0.1208 | benign | -1.02 | Destabilizing | None | N | 0.277 | neutral | N | 0.494002511 | None | None | N |
S/G | 0.0979 | likely_benign | 0.0895 | benign | -1.091 | Destabilizing | 0.018 | N | 0.377 | neutral | None | None | None | None | N |
S/H | 0.1633 | likely_benign | 0.1594 | benign | -1.495 | Destabilizing | 0.138 | N | 0.512 | neutral | None | None | None | None | N |
S/I | 0.0904 | likely_benign | 0.0833 | benign | -0.314 | Destabilizing | None | N | 0.255 | neutral | None | None | None | None | N |
S/K | 0.2305 | likely_benign | 0.2199 | benign | -0.647 | Destabilizing | 0.009 | N | 0.378 | neutral | None | None | None | None | N |
S/L | 0.0799 | likely_benign | 0.0755 | benign | -0.314 | Destabilizing | 0.004 | N | 0.41 | neutral | None | None | None | None | N |
S/M | 0.1304 | likely_benign | 0.1289 | benign | -0.066 | Destabilizing | 0.138 | N | 0.531 | neutral | None | None | None | None | N |
S/N | 0.0844 | likely_benign | 0.0759 | benign | -0.623 | Destabilizing | 0.044 | N | 0.4 | neutral | None | None | None | None | N |
S/P | 0.2868 | likely_benign | 0.2326 | benign | -0.46 | Destabilizing | 0.065 | N | 0.509 | neutral | N | 0.463852962 | None | None | N |
S/Q | 0.227 | likely_benign | 0.2207 | benign | -0.813 | Destabilizing | 0.044 | N | 0.446 | neutral | None | None | None | None | N |
S/R | 0.1776 | likely_benign | 0.1733 | benign | -0.528 | Destabilizing | None | N | 0.224 | neutral | None | None | None | None | N |
S/T | 0.0555 | likely_benign | 0.0576 | benign | -0.689 | Destabilizing | None | N | 0.134 | neutral | N | 0.352084894 | None | None | N |
S/V | 0.0964 | likely_benign | 0.0912 | benign | -0.46 | Destabilizing | None | N | 0.227 | neutral | None | None | None | None | N |
S/W | 0.2249 | likely_benign | 0.2341 | benign | -0.944 | Destabilizing | 0.245 | N | 0.563 | neutral | None | None | None | None | N |
S/Y | 0.1158 | likely_benign | 0.1156 | benign | -0.687 | Destabilizing | None | N | 0.274 | neutral | N | 0.493655794 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.