Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6886 | 20881;20882;20883 | chr2:178725548;178725547;178725546 | chr2:179590275;179590274;179590273 |
N2AB | 6569 | 19930;19931;19932 | chr2:178725548;178725547;178725546 | chr2:179590275;179590274;179590273 |
N2A | 5642 | 17149;17150;17151 | chr2:178725548;178725547;178725546 | chr2:179590275;179590274;179590273 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/P | None | None | 0.202 | D | 0.499 | 0.391 | 0.318828661733 | gnomAD-4.0.0 | 6.84516E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.5208E-05 | None | 0 | 0 | 0 | 0 | 0 |
Q/R | None | None | 0.025 | N | 0.369 | 0.263 | 0.132336055621 | gnomAD-4.0.0 | 6.84516E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99734E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2644 | likely_benign | 0.239 | benign | -0.608 | Destabilizing | 0.015 | N | 0.304 | neutral | None | None | None | None | N |
Q/C | 0.6324 | likely_pathogenic | 0.5539 | ambiguous | -0.015 | Destabilizing | 0.781 | D | 0.543 | neutral | None | None | None | None | N |
Q/D | 0.4498 | ambiguous | 0.4015 | ambiguous | -0.591 | Destabilizing | 0.033 | N | 0.317 | neutral | None | None | None | None | N |
Q/E | 0.0845 | likely_benign | 0.0792 | benign | -0.48 | Destabilizing | None | N | 0.163 | neutral | N | 0.45344118 | None | None | N |
Q/F | 0.6489 | likely_pathogenic | 0.5894 | pathogenic | -0.175 | Destabilizing | 0.142 | N | 0.603 | neutral | None | None | None | None | N |
Q/G | 0.3643 | ambiguous | 0.3301 | benign | -0.983 | Destabilizing | 0.064 | N | 0.38 | neutral | None | None | None | None | N |
Q/H | 0.202 | likely_benign | 0.1682 | benign | -0.771 | Destabilizing | None | N | 0.184 | neutral | N | 0.487729899 | None | None | N |
Q/I | 0.3361 | likely_benign | 0.3031 | benign | 0.357 | Stabilizing | 0.076 | N | 0.519 | neutral | None | None | None | None | N |
Q/K | 0.1127 | likely_benign | 0.1019 | benign | -0.505 | Destabilizing | 0.001 | N | 0.157 | neutral | N | 0.45448133 | None | None | N |
Q/L | 0.1324 | likely_benign | 0.117 | benign | 0.357 | Stabilizing | None | N | 0.331 | neutral | N | 0.452809249 | None | None | N |
Q/M | 0.3549 | ambiguous | 0.321 | benign | 0.658 | Stabilizing | 0.367 | N | 0.419 | neutral | None | None | None | None | N |
Q/N | 0.3115 | likely_benign | 0.2731 | benign | -1.003 | Destabilizing | 0.064 | N | 0.357 | neutral | None | None | None | None | N |
Q/P | 0.7638 | likely_pathogenic | 0.7311 | pathogenic | 0.067 | Stabilizing | 0.202 | N | 0.499 | neutral | D | 0.531270033 | None | None | N |
Q/R | 0.1159 | likely_benign | 0.1086 | benign | -0.457 | Destabilizing | 0.025 | N | 0.369 | neutral | N | 0.455348122 | None | None | N |
Q/S | 0.2538 | likely_benign | 0.2299 | benign | -1.08 | Destabilizing | 0.001 | N | 0.143 | neutral | None | None | None | None | N |
Q/T | 0.1799 | likely_benign | 0.1524 | benign | -0.779 | Destabilizing | 0.033 | N | 0.377 | neutral | None | None | None | None | N |
Q/V | 0.2216 | likely_benign | 0.1971 | benign | 0.067 | Stabilizing | 0.033 | N | 0.415 | neutral | None | None | None | None | N |
Q/W | 0.536 | ambiguous | 0.499 | ambiguous | -0.098 | Destabilizing | 0.931 | D | 0.542 | neutral | None | None | None | None | N |
Q/Y | 0.4204 | ambiguous | 0.3642 | ambiguous | 0.112 | Stabilizing | 0.076 | N | 0.512 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.