Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6892 | 20899;20900;20901 | chr2:178725530;178725529;178725528 | chr2:179590257;179590256;179590255 |
N2AB | 6575 | 19948;19949;19950 | chr2:178725530;178725529;178725528 | chr2:179590257;179590256;179590255 |
N2A | 5648 | 17167;17168;17169 | chr2:178725530;178725529;178725528 | chr2:179590257;179590256;179590255 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs185833299 | -0.048 | 0.978 | N | 0.417 | 0.341 | None | gnomAD-2.1.1 | 2.14E-05 | None | None | None | None | N | None | 2.06954E-04 | 2.84E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/K | rs185833299 | -0.048 | 0.978 | N | 0.417 | 0.341 | None | gnomAD-3.1.2 | 3.29E-05 | None | None | None | None | N | None | 9.65E-05 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs185833299 | -0.048 | 0.978 | N | 0.417 | 0.341 | None | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 0 | 1.4E-03 | None | None | 0 | 0 | None | None | None | 0 | None |
E/K | rs185833299 | -0.048 | 0.978 | N | 0.417 | 0.341 | None | gnomAD-4.0.0 | 7.43852E-06 | None | None | None | None | N | None | 1.33344E-04 | 1.66811E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.60108E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1481 | likely_benign | 0.1551 | benign | -0.127 | Destabilizing | 0.989 | D | 0.381 | neutral | N | 0.50643309 | None | None | N |
E/C | 0.8159 | likely_pathogenic | 0.8262 | pathogenic | -0.236 | Destabilizing | 1.0 | D | 0.591 | neutral | None | None | None | None | N |
E/D | 0.1121 | likely_benign | 0.0969 | benign | -0.262 | Destabilizing | 0.054 | N | 0.186 | neutral | N | 0.465178327 | None | None | N |
E/F | 0.7005 | likely_pathogenic | 0.7457 | pathogenic | -0.03 | Destabilizing | 0.999 | D | 0.559 | neutral | None | None | None | None | N |
E/G | 0.0748 | likely_benign | 0.0776 | benign | -0.276 | Destabilizing | 0.978 | D | 0.393 | neutral | N | 0.425926505 | None | None | N |
E/H | 0.4917 | ambiguous | 0.5213 | ambiguous | 0.536 | Stabilizing | 0.999 | D | 0.363 | neutral | None | None | None | None | N |
E/I | 0.4054 | ambiguous | 0.4472 | ambiguous | 0.219 | Stabilizing | 0.999 | D | 0.541 | neutral | None | None | None | None | N |
E/K | 0.1635 | likely_benign | 0.1975 | benign | 0.397 | Stabilizing | 0.978 | D | 0.417 | neutral | N | 0.475648823 | None | None | N |
E/L | 0.4042 | ambiguous | 0.4317 | ambiguous | 0.219 | Stabilizing | 0.998 | D | 0.525 | neutral | None | None | None | None | N |
E/M | 0.4661 | ambiguous | 0.4947 | ambiguous | 0.011 | Stabilizing | 1.0 | D | 0.479 | neutral | None | None | None | None | N |
E/N | 0.2061 | likely_benign | 0.1865 | benign | 0.033 | Stabilizing | 0.983 | D | 0.355 | neutral | None | None | None | None | N |
E/P | 0.6176 | likely_pathogenic | 0.6522 | pathogenic | 0.122 | Stabilizing | 0.999 | D | 0.393 | neutral | None | None | None | None | N |
E/Q | 0.1531 | likely_benign | 0.1709 | benign | 0.072 | Stabilizing | 0.989 | D | 0.394 | neutral | N | 0.493599866 | None | None | N |
E/R | 0.2747 | likely_benign | 0.327 | benign | 0.681 | Stabilizing | 0.998 | D | 0.359 | neutral | None | None | None | None | N |
E/S | 0.1817 | likely_benign | 0.1784 | benign | -0.101 | Destabilizing | 0.983 | D | 0.376 | neutral | None | None | None | None | N |
E/T | 0.2044 | likely_benign | 0.2103 | benign | 0.031 | Stabilizing | 0.992 | D | 0.367 | neutral | None | None | None | None | N |
E/V | 0.2222 | likely_benign | 0.2634 | benign | 0.122 | Stabilizing | 0.999 | D | 0.415 | neutral | N | 0.504432935 | None | None | N |
E/W | 0.8163 | likely_pathogenic | 0.85 | pathogenic | 0.071 | Stabilizing | 1.0 | D | 0.599 | neutral | None | None | None | None | N |
E/Y | 0.5408 | ambiguous | 0.5661 | pathogenic | 0.203 | Stabilizing | 0.999 | D | 0.484 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.