Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6893 | 20902;20903;20904 | chr2:178725527;178725526;178725525 | chr2:179590254;179590253;179590252 |
N2AB | 6576 | 19951;19952;19953 | chr2:178725527;178725526;178725525 | chr2:179590254;179590253;179590252 |
N2A | 5649 | 17170;17171;17172 | chr2:178725527;178725526;178725525 | chr2:179590254;179590253;179590252 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs2079188744 | None | 0.722 | N | 0.401 | 0.323 | 0.421674004627 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/G | rs2079188744 | None | 0.722 | N | 0.401 | 0.323 | 0.421674004627 | gnomAD-4.0.0 | 6.57194E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47042E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1142 | likely_benign | 0.1394 | benign | -0.69 | Destabilizing | 0.722 | D | 0.377 | neutral | N | 0.495202664 | None | None | N |
E/C | 0.7972 | likely_pathogenic | 0.849 | pathogenic | -0.382 | Destabilizing | 0.996 | D | 0.609 | neutral | None | None | None | None | N |
E/D | 0.0884 | likely_benign | 0.0826 | benign | -0.678 | Destabilizing | 0.008 | N | 0.161 | neutral | N | 0.487822831 | None | None | N |
E/F | 0.6296 | likely_pathogenic | 0.7114 | pathogenic | -0.09 | Destabilizing | 0.961 | D | 0.553 | neutral | None | None | None | None | N |
E/G | 0.1324 | likely_benign | 0.1691 | benign | -1.0 | Destabilizing | 0.722 | D | 0.401 | neutral | N | 0.508333396 | None | None | N |
E/H | 0.4546 | ambiguous | 0.5295 | ambiguous | -0.014 | Destabilizing | 0.011 | N | 0.201 | neutral | None | None | None | None | N |
E/I | 0.2956 | likely_benign | 0.3294 | benign | 0.136 | Stabilizing | 0.961 | D | 0.553 | neutral | None | None | None | None | N |
E/K | 0.1848 | likely_benign | 0.2479 | benign | -0.095 | Destabilizing | 0.722 | D | 0.393 | neutral | N | 0.488401808 | None | None | N |
E/L | 0.3309 | likely_benign | 0.4041 | ambiguous | 0.136 | Stabilizing | 0.961 | D | 0.449 | neutral | None | None | None | None | N |
E/M | 0.3967 | ambiguous | 0.4423 | ambiguous | 0.304 | Stabilizing | 0.996 | D | 0.54 | neutral | None | None | None | None | N |
E/N | 0.1785 | likely_benign | 0.2012 | benign | -0.728 | Destabilizing | 0.633 | D | 0.337 | neutral | None | None | None | None | N |
E/P | 0.4359 | ambiguous | 0.6693 | pathogenic | -0.118 | Destabilizing | 0.961 | D | 0.427 | neutral | None | None | None | None | N |
E/Q | 0.1731 | likely_benign | 0.204 | benign | -0.609 | Destabilizing | 0.722 | D | 0.396 | neutral | N | 0.496137262 | None | None | N |
E/R | 0.3219 | likely_benign | 0.4203 | ambiguous | 0.255 | Stabilizing | 0.923 | D | 0.377 | neutral | None | None | None | None | N |
E/S | 0.1899 | likely_benign | 0.2194 | benign | -0.924 | Destabilizing | 0.633 | D | 0.361 | neutral | None | None | None | None | N |
E/T | 0.1877 | likely_benign | 0.21 | benign | -0.659 | Destabilizing | 0.775 | D | 0.381 | neutral | None | None | None | None | N |
E/V | 0.1522 | likely_benign | 0.1795 | benign | -0.118 | Destabilizing | 0.949 | D | 0.433 | neutral | D | 0.525930672 | None | None | N |
E/W | 0.8485 | likely_pathogenic | 0.8984 | pathogenic | 0.215 | Stabilizing | 0.996 | D | 0.629 | neutral | None | None | None | None | N |
E/Y | 0.4942 | ambiguous | 0.5669 | pathogenic | 0.183 | Stabilizing | 0.923 | D | 0.511 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.