Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6895 | 20908;20909;20910 | chr2:178725521;178725520;178725519 | chr2:179590248;179590247;179590246 |
N2AB | 6578 | 19957;19958;19959 | chr2:178725521;178725520;178725519 | chr2:179590248;179590247;179590246 |
N2A | 5651 | 17176;17177;17178 | chr2:178725521;178725520;178725519 | chr2:179590248;179590247;179590246 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/S | rs2079186805 | None | 0.317 | D | 0.673 | 0.309 | 0.852700824655 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
I/S | rs2079186805 | None | 0.317 | D | 0.673 | 0.309 | 0.852700824655 | gnomAD-4.0.0 | 6.57471E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47046E-05 | 0 | 0 |
I/V | rs749405543 | -1.31 | None | N | 0.149 | 0.13 | 0.253205268125 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
I/V | rs749405543 | -1.31 | None | N | 0.149 | 0.13 | 0.253205268125 | gnomAD-4.0.0 | 1.59248E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86046E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.4467 | ambiguous | 0.5901 | pathogenic | -2.139 | Highly Destabilizing | 0.035 | N | 0.591 | neutral | None | None | None | None | N |
I/C | 0.761 | likely_pathogenic | 0.8099 | pathogenic | -1.473 | Destabilizing | 0.824 | D | 0.625 | neutral | None | None | None | None | N |
I/D | 0.8305 | likely_pathogenic | 0.9473 | pathogenic | -2.275 | Highly Destabilizing | 0.555 | D | 0.716 | prob.delet. | None | None | None | None | N |
I/E | 0.7019 | likely_pathogenic | 0.878 | pathogenic | -2.061 | Highly Destabilizing | 0.555 | D | 0.698 | prob.neutral | None | None | None | None | N |
I/F | 0.1814 | likely_benign | 0.2362 | benign | -1.277 | Destabilizing | 0.317 | N | 0.659 | neutral | N | 0.491598721 | None | None | N |
I/G | 0.7293 | likely_pathogenic | 0.8693 | pathogenic | -2.625 | Highly Destabilizing | 0.555 | D | 0.701 | prob.neutral | None | None | None | None | N |
I/H | 0.6744 | likely_pathogenic | 0.829 | pathogenic | -1.828 | Destabilizing | 0.935 | D | 0.663 | neutral | None | None | None | None | N |
I/K | 0.5346 | ambiguous | 0.791 | pathogenic | -1.722 | Destabilizing | 0.555 | D | 0.703 | prob.neutral | None | None | None | None | N |
I/L | 0.1065 | likely_benign | 0.1093 | benign | -0.754 | Destabilizing | None | N | 0.155 | neutral | N | 0.436546144 | None | None | N |
I/M | 0.1255 | likely_benign | 0.1523 | benign | -0.716 | Destabilizing | 0.317 | N | 0.665 | neutral | N | 0.498093181 | None | None | N |
I/N | 0.4613 | ambiguous | 0.6982 | pathogenic | -2.12 | Highly Destabilizing | 0.741 | D | 0.713 | prob.delet. | N | 0.499360629 | None | None | N |
I/P | 0.6776 | likely_pathogenic | 0.8512 | pathogenic | -1.196 | Destabilizing | 0.791 | D | 0.713 | prob.delet. | None | None | None | None | N |
I/Q | 0.5524 | ambiguous | 0.7649 | pathogenic | -1.982 | Destabilizing | 0.791 | D | 0.686 | prob.neutral | None | None | None | None | N |
I/R | 0.454 | ambiguous | 0.7272 | pathogenic | -1.451 | Destabilizing | 0.555 | D | 0.716 | prob.delet. | None | None | None | None | N |
I/S | 0.454 | ambiguous | 0.658 | pathogenic | -2.764 | Highly Destabilizing | 0.317 | N | 0.673 | neutral | D | 0.539430943 | None | None | N |
I/T | 0.3542 | ambiguous | 0.5334 | ambiguous | -2.399 | Highly Destabilizing | 0.062 | N | 0.601 | neutral | D | 0.531328748 | None | None | N |
I/V | 0.0786 | likely_benign | 0.078 | benign | -1.196 | Destabilizing | None | N | 0.149 | neutral | N | 0.444901842 | None | None | N |
I/W | 0.76 | likely_pathogenic | 0.8578 | pathogenic | -1.54 | Destabilizing | 0.935 | D | 0.678 | prob.neutral | None | None | None | None | N |
I/Y | 0.5523 | ambiguous | 0.6852 | pathogenic | -1.236 | Destabilizing | 0.555 | D | 0.695 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.