Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6896 | 20911;20912;20913 | chr2:178725518;178725517;178725516 | chr2:179590245;179590244;179590243 |
N2AB | 6579 | 19960;19961;19962 | chr2:178725518;178725517;178725516 | chr2:179590245;179590244;179590243 |
N2A | 5652 | 17179;17180;17181 | chr2:178725518;178725517;178725516 | chr2:179590245;179590244;179590243 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | rs1026814261 | None | 0.4 | N | 0.267 | 0.19 | 0.282575091529 | gnomAD-4.0.0 | 3.42217E-06 | None | None | None | None | N | None | 2.99115E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79936E-06 | 0 | 3.31433E-05 |
R/S | None | None | 0.98 | N | 0.577 | 0.332 | 0.490839437361 | gnomAD-4.0.0 | 1.59236E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86026E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.4601 | ambiguous | 0.5097 | ambiguous | 0.064 | Stabilizing | 0.964 | D | 0.589 | neutral | None | None | None | None | N |
R/C | 0.3398 | likely_benign | 0.3741 | ambiguous | -0.324 | Destabilizing | 1.0 | D | 0.619 | neutral | None | None | None | None | N |
R/D | 0.7289 | likely_pathogenic | 0.7722 | pathogenic | -0.351 | Destabilizing | 0.998 | D | 0.502 | neutral | None | None | None | None | N |
R/E | 0.3443 | ambiguous | 0.4054 | ambiguous | -0.305 | Destabilizing | 0.985 | D | 0.551 | neutral | None | None | None | None | N |
R/F | 0.6127 | likely_pathogenic | 0.6722 | pathogenic | -0.269 | Destabilizing | 0.999 | D | 0.591 | neutral | None | None | None | None | N |
R/G | 0.289 | likely_benign | 0.333 | benign | -0.074 | Destabilizing | 0.135 | N | 0.345 | neutral | N | 0.491759624 | None | None | N |
R/H | 0.1589 | likely_benign | 0.1582 | benign | -0.596 | Destabilizing | 0.999 | D | 0.533 | neutral | None | None | None | None | N |
R/I | 0.3918 | ambiguous | 0.44 | ambiguous | 0.381 | Stabilizing | 0.999 | D | 0.594 | neutral | N | 0.503534003 | None | None | N |
R/K | 0.15 | likely_benign | 0.1397 | benign | -0.209 | Destabilizing | 0.4 | N | 0.267 | neutral | N | 0.510430614 | None | None | N |
R/L | 0.3299 | likely_benign | 0.3779 | ambiguous | 0.381 | Stabilizing | 0.993 | D | 0.523 | neutral | None | None | None | None | N |
R/M | 0.3849 | ambiguous | 0.4313 | ambiguous | -0.127 | Destabilizing | 1.0 | D | 0.551 | neutral | None | None | None | None | N |
R/N | 0.6941 | likely_pathogenic | 0.7156 | pathogenic | -0.212 | Destabilizing | 0.993 | D | 0.543 | neutral | None | None | None | None | N |
R/P | 0.5937 | likely_pathogenic | 0.6631 | pathogenic | 0.294 | Stabilizing | 0.999 | D | 0.575 | neutral | None | None | None | None | N |
R/Q | 0.1226 | likely_benign | 0.1302 | benign | -0.204 | Destabilizing | 0.996 | D | 0.553 | neutral | None | None | None | None | N |
R/S | 0.5515 | ambiguous | 0.6003 | pathogenic | -0.338 | Destabilizing | 0.98 | D | 0.577 | neutral | N | 0.520282248 | None | None | N |
R/T | 0.2791 | likely_benign | 0.3144 | benign | -0.186 | Destabilizing | 0.99 | D | 0.553 | neutral | N | 0.493866438 | None | None | N |
R/V | 0.4567 | ambiguous | 0.4929 | ambiguous | 0.294 | Stabilizing | 0.998 | D | 0.564 | neutral | None | None | None | None | N |
R/W | 0.168 | likely_benign | 0.2183 | benign | -0.485 | Destabilizing | 1.0 | D | 0.641 | neutral | None | None | None | None | N |
R/Y | 0.4817 | ambiguous | 0.5508 | ambiguous | -0.072 | Destabilizing | 0.999 | D | 0.571 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.