Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6899 | 20920;20921;20922 | chr2:178725509;178725508;178725507 | chr2:179590236;179590235;179590234 |
N2AB | 6582 | 19969;19970;19971 | chr2:178725509;178725508;178725507 | chr2:179590236;179590235;179590234 |
N2A | 5655 | 17188;17189;17190 | chr2:178725509;178725508;178725507 | chr2:179590236;179590235;179590234 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs777803266 | -0.193 | 0.989 | N | 0.391 | 0.338 | 0.288727942641 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
E/G | rs777803266 | -0.193 | 0.989 | N | 0.391 | 0.338 | 0.288727942641 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/G | rs777803266 | -0.193 | 0.989 | N | 0.391 | 0.338 | 0.288727942641 | gnomAD-4.0.0 | 3.8452E-06 | None | None | None | None | N | None | 3.38409E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.34109E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1988 | likely_benign | 0.1936 | benign | 0.03 | Stabilizing | 0.994 | D | 0.427 | neutral | N | 0.461452559 | None | None | N |
E/C | 0.8975 | likely_pathogenic | 0.9095 | pathogenic | -0.187 | Destabilizing | 1.0 | D | 0.599 | neutral | None | None | None | None | N |
E/D | 0.0988 | likely_benign | 0.0874 | benign | -0.44 | Destabilizing | 0.217 | N | 0.272 | neutral | N | 0.415745931 | None | None | N |
E/F | 0.8374 | likely_pathogenic | 0.8642 | pathogenic | -0.106 | Destabilizing | 1.0 | D | 0.527 | neutral | None | None | None | None | N |
E/G | 0.1378 | likely_benign | 0.1353 | benign | -0.041 | Destabilizing | 0.989 | D | 0.391 | neutral | N | 0.499804535 | None | None | N |
E/H | 0.5235 | ambiguous | 0.5538 | ambiguous | 0.473 | Stabilizing | 0.999 | D | 0.445 | neutral | None | None | None | None | N |
E/I | 0.586 | likely_pathogenic | 0.58 | pathogenic | 0.156 | Stabilizing | 1.0 | D | 0.54 | neutral | None | None | None | None | N |
E/K | 0.1339 | likely_benign | 0.157 | benign | 0.341 | Stabilizing | 0.989 | D | 0.448 | neutral | N | 0.485915305 | None | None | N |
E/L | 0.5647 | likely_pathogenic | 0.5791 | pathogenic | 0.156 | Stabilizing | 0.999 | D | 0.531 | neutral | None | None | None | None | N |
E/M | 0.6514 | likely_pathogenic | 0.6657 | pathogenic | -0.028 | Destabilizing | 1.0 | D | 0.493 | neutral | None | None | None | None | N |
E/N | 0.2539 | likely_benign | 0.2371 | benign | 0.188 | Stabilizing | 0.784 | D | 0.306 | neutral | None | None | None | None | N |
E/P | 0.3454 | ambiguous | 0.3382 | benign | 0.129 | Stabilizing | 1.0 | D | 0.421 | neutral | None | None | None | None | N |
E/Q | 0.1885 | likely_benign | 0.1972 | benign | 0.181 | Stabilizing | 0.998 | D | 0.423 | neutral | N | 0.457440087 | None | None | N |
E/R | 0.2428 | likely_benign | 0.2922 | benign | 0.48 | Stabilizing | 0.999 | D | 0.439 | neutral | None | None | None | None | N |
E/S | 0.2132 | likely_benign | 0.2046 | benign | 0.064 | Stabilizing | 0.992 | D | 0.419 | neutral | None | None | None | None | N |
E/T | 0.3224 | likely_benign | 0.31 | benign | 0.134 | Stabilizing | 0.992 | D | 0.385 | neutral | None | None | None | None | N |
E/V | 0.3727 | ambiguous | 0.3726 | ambiguous | 0.129 | Stabilizing | 0.999 | D | 0.458 | neutral | N | 0.481331241 | None | None | N |
E/W | 0.8832 | likely_pathogenic | 0.9157 | pathogenic | -0.115 | Destabilizing | 1.0 | D | 0.615 | neutral | None | None | None | None | N |
E/Y | 0.6958 | likely_pathogenic | 0.7271 | pathogenic | 0.094 | Stabilizing | 1.0 | D | 0.471 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.