Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6900 | 20923;20924;20925 | chr2:178725506;178725505;178725504 | chr2:179590233;179590232;179590231 |
N2AB | 6583 | 19972;19973;19974 | chr2:178725506;178725505;178725504 | chr2:179590233;179590232;179590231 |
N2A | 5656 | 17191;17192;17193 | chr2:178725506;178725505;178725504 | chr2:179590233;179590232;179590231 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | None | None | 0.998 | N | 0.564 | 0.197 | 0.0920862733494 | gnomAD-4.0.0 | 3.42199E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49822E-06 | 0 | 0 |
N/S | rs1389235832 | None | 0.998 | N | 0.383 | 0.217 | 0.117506650769 | gnomAD-4.0.0 | 1.59226E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86015E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.4198 | ambiguous | 0.4062 | ambiguous | -0.799 | Destabilizing | 0.998 | D | 0.603 | neutral | None | None | None | None | N |
N/C | 0.5936 | likely_pathogenic | 0.5772 | pathogenic | 0.139 | Stabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
N/D | 0.1619 | likely_benign | 0.1579 | benign | 0.087 | Stabilizing | 0.998 | D | 0.441 | neutral | N | 0.508656092 | None | None | N |
N/E | 0.5365 | ambiguous | 0.5344 | ambiguous | 0.116 | Stabilizing | 0.997 | D | 0.516 | neutral | None | None | None | None | N |
N/F | 0.722 | likely_pathogenic | 0.7024 | pathogenic | -0.831 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
N/G | 0.4107 | ambiguous | 0.3788 | ambiguous | -1.062 | Destabilizing | 0.998 | D | 0.393 | neutral | None | None | None | None | N |
N/H | 0.2132 | likely_benign | 0.2015 | benign | -0.893 | Destabilizing | 0.64 | D | 0.273 | neutral | N | 0.459286512 | None | None | N |
N/I | 0.3836 | ambiguous | 0.3918 | ambiguous | -0.162 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | N | 0.478151235 | None | None | N |
N/K | 0.495 | ambiguous | 0.507 | ambiguous | -0.045 | Destabilizing | 0.998 | D | 0.564 | neutral | N | 0.448749446 | None | None | N |
N/L | 0.4654 | ambiguous | 0.4587 | ambiguous | -0.162 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
N/M | 0.4829 | ambiguous | 0.466 | ambiguous | 0.304 | Stabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | N |
N/P | 0.8592 | likely_pathogenic | 0.8532 | pathogenic | -0.345 | Destabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | N |
N/Q | 0.5423 | ambiguous | 0.5289 | ambiguous | -0.595 | Destabilizing | 1.0 | D | 0.649 | neutral | None | None | None | None | N |
N/R | 0.5815 | likely_pathogenic | 0.5944 | pathogenic | -0.019 | Destabilizing | 1.0 | D | 0.639 | neutral | None | None | None | None | N |
N/S | 0.1683 | likely_benign | 0.1625 | benign | -0.543 | Destabilizing | 0.998 | D | 0.383 | neutral | N | 0.457387181 | None | None | N |
N/T | 0.2226 | likely_benign | 0.2155 | benign | -0.332 | Destabilizing | 0.999 | D | 0.566 | neutral | N | 0.468996976 | None | None | N |
N/V | 0.4369 | ambiguous | 0.4399 | ambiguous | -0.345 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
N/W | 0.8922 | likely_pathogenic | 0.8854 | pathogenic | -0.618 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
N/Y | 0.2561 | likely_benign | 0.2454 | benign | -0.423 | Destabilizing | 0.999 | D | 0.663 | neutral | N | 0.469757444 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.