Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6905 | 20938;20939;20940 | chr2:178725491;178725490;178725489 | chr2:179590218;179590217;179590216 |
N2AB | 6588 | 19987;19988;19989 | chr2:178725491;178725490;178725489 | chr2:179590218;179590217;179590216 |
N2A | 5661 | 17206;17207;17208 | chr2:178725491;178725490;178725489 | chr2:179590218;179590217;179590216 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | rs781202077 | -1.1 | 0.001 | N | 0.297 | 0.162 | 0.373357554552 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
F/L | rs781202077 | -1.1 | 0.001 | N | 0.297 | 0.162 | 0.373357554552 | gnomAD-4.0.0 | 1.59238E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86007E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.5183 | ambiguous | 0.5596 | ambiguous | -2.207 | Highly Destabilizing | 0.388 | N | 0.653 | neutral | None | None | None | None | N |
F/C | 0.3223 | likely_benign | 0.3717 | ambiguous | -1.216 | Destabilizing | 0.975 | D | 0.672 | neutral | N | 0.495011627 | None | None | N |
F/D | 0.8029 | likely_pathogenic | 0.8218 | pathogenic | -1.11 | Destabilizing | 0.818 | D | 0.703 | prob.neutral | None | None | None | None | N |
F/E | 0.8505 | likely_pathogenic | 0.861 | pathogenic | -1.003 | Destabilizing | 0.69 | D | 0.697 | prob.neutral | None | None | None | None | N |
F/G | 0.7906 | likely_pathogenic | 0.818 | pathogenic | -2.567 | Highly Destabilizing | 0.818 | D | 0.695 | prob.neutral | None | None | None | None | N |
F/H | 0.4263 | ambiguous | 0.4651 | ambiguous | -0.875 | Destabilizing | 0.005 | N | 0.429 | neutral | None | None | None | None | N |
F/I | 0.2856 | likely_benign | 0.2863 | benign | -1.114 | Destabilizing | 0.193 | N | 0.559 | neutral | D | 0.523861271 | None | None | N |
F/K | 0.8566 | likely_pathogenic | 0.8735 | pathogenic | -1.293 | Destabilizing | 0.69 | D | 0.699 | prob.neutral | None | None | None | None | N |
F/L | 0.8269 | likely_pathogenic | 0.8195 | pathogenic | -1.114 | Destabilizing | 0.001 | N | 0.297 | neutral | N | 0.482730269 | None | None | N |
F/M | 0.5451 | ambiguous | 0.5527 | ambiguous | -0.839 | Destabilizing | 0.69 | D | 0.597 | neutral | None | None | None | None | N |
F/N | 0.5865 | likely_pathogenic | 0.6117 | pathogenic | -1.4 | Destabilizing | 0.69 | D | 0.703 | prob.neutral | None | None | None | None | N |
F/P | 0.9823 | likely_pathogenic | 0.9834 | pathogenic | -1.473 | Destabilizing | 0.932 | D | 0.695 | prob.neutral | None | None | None | None | N |
F/Q | 0.7664 | likely_pathogenic | 0.8001 | pathogenic | -1.452 | Destabilizing | 0.69 | D | 0.695 | prob.neutral | None | None | None | None | N |
F/R | 0.7218 | likely_pathogenic | 0.757 | pathogenic | -0.672 | Destabilizing | 0.69 | D | 0.701 | prob.neutral | None | None | None | None | N |
F/S | 0.403 | ambiguous | 0.4275 | ambiguous | -2.203 | Highly Destabilizing | 0.627 | D | 0.698 | prob.neutral | D | 0.532864756 | None | None | N |
F/T | 0.4656 | ambiguous | 0.4779 | ambiguous | -1.999 | Destabilizing | 0.818 | D | 0.699 | prob.neutral | None | None | None | None | N |
F/V | 0.2456 | likely_benign | 0.2485 | benign | -1.473 | Destabilizing | 0.193 | N | 0.571 | neutral | N | 0.513238845 | None | None | N |
F/W | 0.4063 | ambiguous | 0.4301 | ambiguous | -0.242 | Destabilizing | 0.944 | D | 0.596 | neutral | None | None | None | None | N |
F/Y | 0.0954 | likely_benign | 0.1047 | benign | -0.469 | Destabilizing | 0.001 | N | 0.263 | neutral | N | 0.457713637 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.