Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6907 | 20944;20945;20946 | chr2:178725485;178725484;178725483 | chr2:179590212;179590211;179590210 |
N2AB | 6590 | 19993;19994;19995 | chr2:178725485;178725484;178725483 | chr2:179590212;179590211;179590210 |
N2A | 5663 | 17212;17213;17214 | chr2:178725485;178725484;178725483 | chr2:179590212;179590211;179590210 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | None | None | 0.001 | N | 0.151 | 0.084 | 0.104622674875 | gnomAD-4.0.0 | 1.59251E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02572E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1726 | likely_benign | 0.1725 | benign | -0.032 | Destabilizing | 0.012 | N | 0.267 | neutral | N | 0.489686329 | None | None | I |
E/C | 0.808 | likely_pathogenic | 0.8038 | pathogenic | -0.298 | Destabilizing | 0.864 | D | 0.16 | neutral | None | None | None | None | I |
E/D | 0.0695 | likely_benign | 0.0615 | benign | -0.415 | Destabilizing | None | N | 0.115 | neutral | N | 0.430579311 | None | None | I |
E/F | 0.8228 | likely_pathogenic | 0.8102 | pathogenic | -0.102 | Destabilizing | 0.628 | D | 0.188 | neutral | None | None | None | None | I |
E/G | 0.0785 | likely_benign | 0.0814 | benign | -0.133 | Destabilizing | None | N | 0.165 | neutral | N | 0.469825558 | None | None | I |
E/H | 0.3715 | ambiguous | 0.3625 | ambiguous | 0.551 | Stabilizing | 0.214 | N | 0.198 | neutral | None | None | None | None | I |
E/I | 0.6725 | likely_pathogenic | 0.6751 | pathogenic | 0.173 | Stabilizing | 0.356 | N | 0.233 | neutral | None | None | None | None | I |
E/K | 0.1271 | likely_benign | 0.1277 | benign | 0.32 | Stabilizing | 0.001 | N | 0.202 | neutral | N | 0.491398483 | None | None | I |
E/L | 0.5503 | ambiguous | 0.5525 | ambiguous | 0.173 | Stabilizing | 0.072 | N | 0.299 | neutral | None | None | None | None | I |
E/M | 0.623 | likely_pathogenic | 0.6237 | pathogenic | -0.093 | Destabilizing | 0.356 | N | 0.171 | neutral | None | None | None | None | I |
E/N | 0.1289 | likely_benign | 0.1159 | benign | 0.082 | Stabilizing | None | N | 0.119 | neutral | None | None | None | None | I |
E/P | 0.4722 | ambiguous | 0.477 | ambiguous | 0.122 | Stabilizing | 0.136 | N | 0.293 | neutral | None | None | None | None | I |
E/Q | 0.1295 | likely_benign | 0.1323 | benign | 0.085 | Stabilizing | 0.001 | N | 0.151 | neutral | N | 0.494612146 | None | None | I |
E/R | 0.1996 | likely_benign | 0.2076 | benign | 0.569 | Stabilizing | 0.038 | N | 0.208 | neutral | None | None | None | None | I |
E/S | 0.1504 | likely_benign | 0.1484 | benign | -0.045 | Destabilizing | 0.003 | N | 0.212 | neutral | None | None | None | None | I |
E/T | 0.3054 | likely_benign | 0.3105 | benign | 0.046 | Stabilizing | 0.038 | N | 0.281 | neutral | None | None | None | None | I |
E/V | 0.4549 | ambiguous | 0.464 | ambiguous | 0.122 | Stabilizing | 0.055 | N | 0.309 | neutral | N | 0.479507588 | None | None | I |
E/W | 0.8408 | likely_pathogenic | 0.8393 | pathogenic | -0.071 | Destabilizing | 0.864 | D | 0.182 | neutral | None | None | None | None | I |
E/Y | 0.5885 | likely_pathogenic | 0.5729 | pathogenic | 0.112 | Stabilizing | 0.356 | N | 0.193 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.