Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6910 | 20953;20954;20955 | chr2:178725476;178725475;178725474 | chr2:179590203;179590202;179590201 |
N2AB | 6593 | 20002;20003;20004 | chr2:178725476;178725475;178725474 | chr2:179590203;179590202;179590201 |
N2A | 5666 | 17221;17222;17223 | chr2:178725476;178725475;178725474 | chr2:179590203;179590202;179590201 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | rs2079177597 | None | 0.37 | N | 0.488 | 0.205 | 0.195762928549 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.78469E-04 |
A/V | rs2079177597 | None | 0.37 | N | 0.488 | 0.205 | 0.195762928549 | gnomAD-4.0.0 | 6.57333E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.78469E-04 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6683 | likely_pathogenic | 0.6783 | pathogenic | -0.785 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
A/D | 0.9813 | likely_pathogenic | 0.9868 | pathogenic | -1.736 | Destabilizing | 0.999 | D | 0.799 | deleterious | None | None | None | None | N |
A/E | 0.955 | likely_pathogenic | 0.9661 | pathogenic | -1.515 | Destabilizing | 0.999 | D | 0.763 | deleterious | N | 0.473493654 | None | None | N |
A/F | 0.7551 | likely_pathogenic | 0.7653 | pathogenic | -0.424 | Destabilizing | 0.998 | D | 0.802 | deleterious | None | None | None | None | N |
A/G | 0.401 | ambiguous | 0.4031 | ambiguous | -1.195 | Destabilizing | 0.996 | D | 0.642 | neutral | N | 0.504309065 | None | None | N |
A/H | 0.9674 | likely_pathogenic | 0.9704 | pathogenic | -1.769 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
A/I | 0.4329 | ambiguous | 0.487 | ambiguous | 0.701 | Stabilizing | 0.967 | D | 0.705 | prob.neutral | None | None | None | None | N |
A/K | 0.9824 | likely_pathogenic | 0.9861 | pathogenic | -0.63 | Destabilizing | 0.999 | D | 0.76 | deleterious | None | None | None | None | N |
A/L | 0.421 | ambiguous | 0.4616 | ambiguous | 0.701 | Stabilizing | 0.967 | D | 0.697 | prob.neutral | None | None | None | None | N |
A/M | 0.5497 | ambiguous | 0.5804 | pathogenic | 0.33 | Stabilizing | 0.999 | D | 0.78 | deleterious | None | None | None | None | N |
A/N | 0.9417 | likely_pathogenic | 0.9494 | pathogenic | -0.977 | Destabilizing | 0.999 | D | 0.797 | deleterious | None | None | None | None | N |
A/P | 0.9493 | likely_pathogenic | 0.9625 | pathogenic | 0.286 | Stabilizing | 0.999 | D | 0.793 | deleterious | N | 0.491597909 | None | None | N |
A/Q | 0.9363 | likely_pathogenic | 0.9424 | pathogenic | -0.717 | Destabilizing | 0.999 | D | 0.793 | deleterious | None | None | None | None | N |
A/R | 0.9594 | likely_pathogenic | 0.9663 | pathogenic | -0.944 | Destabilizing | 0.999 | D | 0.795 | deleterious | None | None | None | None | N |
A/S | 0.3073 | likely_benign | 0.3107 | benign | -1.434 | Destabilizing | 0.989 | D | 0.644 | neutral | N | 0.494051999 | None | None | N |
A/T | 0.2423 | likely_benign | 0.2672 | benign | -1.065 | Destabilizing | 0.978 | D | 0.644 | neutral | N | 0.471212248 | None | None | N |
A/V | 0.1757 | likely_benign | 0.2057 | benign | 0.286 | Stabilizing | 0.37 | N | 0.488 | neutral | N | 0.473639441 | None | None | N |
A/W | 0.9795 | likely_pathogenic | 0.9823 | pathogenic | -1.23 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
A/Y | 0.9248 | likely_pathogenic | 0.9264 | pathogenic | -0.578 | Destabilizing | 0.999 | D | 0.803 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.