Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC691220959;20960;20961 chr2:178725470;178725469;178725468chr2:179590197;179590196;179590195
N2AB659520008;20009;20010 chr2:178725470;178725469;178725468chr2:179590197;179590196;179590195
N2A566817227;17228;17229 chr2:178725470;178725469;178725468chr2:179590197;179590196;179590195
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTA
  • RefSeq wild type template codon: GAT
  • Domain: Ig-53
  • Domain position: 59
  • Structural Position: 138
  • Q(SASA): 0.0493
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/I rs879042542 -0.505 0.994 D 0.614 0.508 None gnomAD-2.1.1 3.19E-05 None None None None N None 1.14784E-04 0 None 0 0 None 0 None 0 0 0
L/I rs879042542 -0.505 0.994 D 0.614 0.508 None gnomAD-3.1.2 2.63E-05 None None None None N None 9.65E-05 0 0 0 0 None 0 0 0 0 0
L/P rs780735199 -1.539 0.998 D 0.888 0.865 0.832001373036 gnomAD-2.1.1 3.18E-05 None None None None N None 0 0 None 0 0 None 0 None 0 6.48E-05 0
L/P rs780735199 -1.539 0.998 D 0.888 0.865 0.832001373036 gnomAD-3.1.2 6.57E-06 None None None None N None 0 0 0 0 0 None 0 0 0 0 4.78469E-04
L/P rs780735199 -1.539 0.998 D 0.888 0.865 0.832001373036 gnomAD-4.0.0 2.56391E-06 None None None None N None 0 0 None 0 0 None 1.56966E-05 0 0 0 2.84706E-05

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.9144 likely_pathogenic 0.9291 pathogenic -2.269 Highly Destabilizing 0.611 D 0.604 neutral None None None None N
L/C 0.9 likely_pathogenic 0.9149 pathogenic -1.614 Destabilizing 1.0 D 0.761 deleterious None None None None N
L/D 0.9997 likely_pathogenic 0.9998 pathogenic -3.161 Highly Destabilizing 0.46 N 0.744 deleterious None None None None N
L/E 0.9969 likely_pathogenic 0.9979 pathogenic -2.849 Highly Destabilizing 0.995 D 0.857 deleterious None None None None N
L/F 0.5924 likely_pathogenic 0.6265 pathogenic -1.455 Destabilizing 1.0 D 0.647 neutral None None None None N
L/G 0.9877 likely_pathogenic 0.9908 pathogenic -2.831 Highly Destabilizing 0.992 D 0.851 deleterious None None None None N
L/H 0.9897 likely_pathogenic 0.9928 pathogenic -2.806 Highly Destabilizing 1.0 D 0.877 deleterious None None None None N
L/I 0.2314 likely_benign 0.2497 benign -0.57 Destabilizing 0.994 D 0.614 neutral D 0.535497141 None None N
L/K 0.9929 likely_pathogenic 0.9957 pathogenic -1.815 Destabilizing 0.999 D 0.831 deleterious None None None None N
L/M 0.3119 likely_benign 0.3547 ambiguous -0.877 Destabilizing 1.0 D 0.643 neutral None None None None N
L/N 0.9973 likely_pathogenic 0.9982 pathogenic -2.59 Highly Destabilizing 0.998 D 0.885 deleterious None None None None N
L/P 0.9973 likely_pathogenic 0.9983 pathogenic -1.13 Destabilizing 0.998 D 0.888 deleterious D 0.56141621 None None N
L/Q 0.9799 likely_pathogenic 0.9866 pathogenic -2.174 Highly Destabilizing 0.998 D 0.859 deleterious D 0.56141621 None None N
L/R 0.9826 likely_pathogenic 0.9878 pathogenic -2.106 Highly Destabilizing 0.998 D 0.862 deleterious D 0.56141621 None None N
L/S 0.9906 likely_pathogenic 0.9934 pathogenic -2.995 Highly Destabilizing 0.983 D 0.822 deleterious None None None None N
L/T 0.9729 likely_pathogenic 0.9802 pathogenic -2.518 Highly Destabilizing 0.992 D 0.77 deleterious None None None None N
L/V 0.2586 likely_benign 0.2774 benign -1.13 Destabilizing 0.989 D 0.623 neutral D 0.541537528 None None N
L/W 0.9608 likely_pathogenic 0.9729 pathogenic -1.827 Destabilizing 1.0 D 0.832 deleterious None None None None N
L/Y 0.9662 likely_pathogenic 0.9729 pathogenic -1.62 Destabilizing 1.0 D 0.768 deleterious None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.