Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6912 | 20959;20960;20961 | chr2:178725470;178725469;178725468 | chr2:179590197;179590196;179590195 |
N2AB | 6595 | 20008;20009;20010 | chr2:178725470;178725469;178725468 | chr2:179590197;179590196;179590195 |
N2A | 5668 | 17227;17228;17229 | chr2:178725470;178725469;178725468 | chr2:179590197;179590196;179590195 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/I | rs879042542 | -0.505 | 0.994 | D | 0.614 | 0.508 | None | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 1.14784E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
L/I | rs879042542 | -0.505 | 0.994 | D | 0.614 | 0.508 | None | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | N | None | 9.65E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
L/P | rs780735199 | -1.539 | 0.998 | D | 0.888 | 0.865 | 0.832001373036 | gnomAD-2.1.1 | 3.18E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
L/P | rs780735199 | -1.539 | 0.998 | D | 0.888 | 0.865 | 0.832001373036 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.78469E-04 |
L/P | rs780735199 | -1.539 | 0.998 | D | 0.888 | 0.865 | 0.832001373036 | gnomAD-4.0.0 | 2.56391E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.56966E-05 | 0 | 0 | 0 | 2.84706E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9144 | likely_pathogenic | 0.9291 | pathogenic | -2.269 | Highly Destabilizing | 0.611 | D | 0.604 | neutral | None | None | None | None | N |
L/C | 0.9 | likely_pathogenic | 0.9149 | pathogenic | -1.614 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
L/D | 0.9997 | likely_pathogenic | 0.9998 | pathogenic | -3.161 | Highly Destabilizing | 0.46 | N | 0.744 | deleterious | None | None | None | None | N |
L/E | 0.9969 | likely_pathogenic | 0.9979 | pathogenic | -2.849 | Highly Destabilizing | 0.995 | D | 0.857 | deleterious | None | None | None | None | N |
L/F | 0.5924 | likely_pathogenic | 0.6265 | pathogenic | -1.455 | Destabilizing | 1.0 | D | 0.647 | neutral | None | None | None | None | N |
L/G | 0.9877 | likely_pathogenic | 0.9908 | pathogenic | -2.831 | Highly Destabilizing | 0.992 | D | 0.851 | deleterious | None | None | None | None | N |
L/H | 0.9897 | likely_pathogenic | 0.9928 | pathogenic | -2.806 | Highly Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
L/I | 0.2314 | likely_benign | 0.2497 | benign | -0.57 | Destabilizing | 0.994 | D | 0.614 | neutral | D | 0.535497141 | None | None | N |
L/K | 0.9929 | likely_pathogenic | 0.9957 | pathogenic | -1.815 | Destabilizing | 0.999 | D | 0.831 | deleterious | None | None | None | None | N |
L/M | 0.3119 | likely_benign | 0.3547 | ambiguous | -0.877 | Destabilizing | 1.0 | D | 0.643 | neutral | None | None | None | None | N |
L/N | 0.9973 | likely_pathogenic | 0.9982 | pathogenic | -2.59 | Highly Destabilizing | 0.998 | D | 0.885 | deleterious | None | None | None | None | N |
L/P | 0.9973 | likely_pathogenic | 0.9983 | pathogenic | -1.13 | Destabilizing | 0.998 | D | 0.888 | deleterious | D | 0.56141621 | None | None | N |
L/Q | 0.9799 | likely_pathogenic | 0.9866 | pathogenic | -2.174 | Highly Destabilizing | 0.998 | D | 0.859 | deleterious | D | 0.56141621 | None | None | N |
L/R | 0.9826 | likely_pathogenic | 0.9878 | pathogenic | -2.106 | Highly Destabilizing | 0.998 | D | 0.862 | deleterious | D | 0.56141621 | None | None | N |
L/S | 0.9906 | likely_pathogenic | 0.9934 | pathogenic | -2.995 | Highly Destabilizing | 0.983 | D | 0.822 | deleterious | None | None | None | None | N |
L/T | 0.9729 | likely_pathogenic | 0.9802 | pathogenic | -2.518 | Highly Destabilizing | 0.992 | D | 0.77 | deleterious | None | None | None | None | N |
L/V | 0.2586 | likely_benign | 0.2774 | benign | -1.13 | Destabilizing | 0.989 | D | 0.623 | neutral | D | 0.541537528 | None | None | N |
L/W | 0.9608 | likely_pathogenic | 0.9729 | pathogenic | -1.827 | Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
L/Y | 0.9662 | likely_pathogenic | 0.9729 | pathogenic | -1.62 | Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.