Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6918 | 20977;20978;20979 | chr2:178725452;178725451;178725450 | chr2:179590179;179590178;179590177 |
N2AB | 6601 | 20026;20027;20028 | chr2:178725452;178725451;178725450 | chr2:179590179;179590178;179590177 |
N2A | 5674 | 17245;17246;17247 | chr2:178725452;178725451;178725450 | chr2:179590179;179590178;179590177 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.549 | N | 0.317 | 0.226 | 0.295623431141 | gnomAD-4.0.0 | 1.59341E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.41779E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1653 | likely_benign | 0.1624 | benign | -0.598 | Destabilizing | 0.201 | N | 0.289 | neutral | N | 0.513126989 | None | None | N |
E/C | 0.8786 | likely_pathogenic | 0.8638 | pathogenic | -0.232 | Destabilizing | 0.992 | D | 0.367 | neutral | None | None | None | None | N |
E/D | 0.1379 | likely_benign | 0.1235 | benign | -0.551 | Destabilizing | 0.002 | N | 0.164 | neutral | N | 0.49148228 | None | None | N |
E/F | 0.7045 | likely_pathogenic | 0.6704 | pathogenic | -0.23 | Destabilizing | 0.85 | D | 0.377 | neutral | None | None | None | None | N |
E/G | 0.1506 | likely_benign | 0.1523 | benign | -0.873 | Destabilizing | 0.549 | D | 0.334 | neutral | N | 0.486443706 | None | None | N |
E/H | 0.4861 | ambiguous | 0.4695 | ambiguous | -0.194 | Destabilizing | 0.972 | D | 0.319 | neutral | None | None | None | None | N |
E/I | 0.3546 | ambiguous | 0.326 | benign | 0.121 | Stabilizing | 0.739 | D | 0.346 | neutral | None | None | None | None | N |
E/K | 0.1531 | likely_benign | 0.1556 | benign | -0.087 | Destabilizing | 0.549 | D | 0.317 | neutral | N | 0.500869768 | None | None | N |
E/L | 0.3334 | likely_benign | 0.3134 | benign | 0.121 | Stabilizing | 0.217 | N | 0.374 | neutral | None | None | None | None | N |
E/M | 0.448 | ambiguous | 0.4246 | ambiguous | 0.329 | Stabilizing | 0.127 | N | 0.354 | neutral | None | None | None | None | N |
E/N | 0.2676 | likely_benign | 0.2423 | benign | -0.481 | Destabilizing | 0.447 | N | 0.269 | neutral | None | None | None | None | N |
E/P | 0.786 | likely_pathogenic | 0.7853 | pathogenic | -0.097 | Destabilizing | 0.92 | D | 0.301 | neutral | None | None | None | None | N |
E/Q | 0.1471 | likely_benign | 0.1433 | benign | -0.395 | Destabilizing | 0.549 | D | 0.363 | neutral | N | 0.506064944 | None | None | N |
E/R | 0.2879 | likely_benign | 0.2924 | benign | 0.203 | Stabilizing | 0.92 | D | 0.291 | neutral | None | None | None | None | N |
E/S | 0.1957 | likely_benign | 0.1843 | benign | -0.701 | Destabilizing | 0.059 | N | 0.191 | neutral | None | None | None | None | N |
E/T | 0.2363 | likely_benign | 0.2215 | benign | -0.477 | Destabilizing | 0.447 | N | 0.303 | neutral | None | None | None | None | N |
E/V | 0.2063 | likely_benign | 0.1899 | benign | -0.097 | Destabilizing | 0.379 | N | 0.335 | neutral | N | 0.490077784 | None | None | N |
E/W | 0.9081 | likely_pathogenic | 0.8958 | pathogenic | -0.008 | Destabilizing | 0.992 | D | 0.465 | neutral | None | None | None | None | N |
E/Y | 0.632 | likely_pathogenic | 0.5983 | pathogenic | 0.016 | Stabilizing | 0.92 | D | 0.353 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.