Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6919 | 20980;20981;20982 | chr2:178725449;178725448;178725447 | chr2:179590176;179590175;179590174 |
N2AB | 6602 | 20029;20030;20031 | chr2:178725449;178725448;178725447 | chr2:179590176;179590175;179590174 |
N2A | 5675 | 17248;17249;17250 | chr2:178725449;178725448;178725447 | chr2:179590176;179590175;179590174 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 0.001 | N | 0.145 | 0.134 | 0.178374595973 | gnomAD-4.0.0 | 1.59365E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43674E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0729 | likely_benign | 0.0695 | benign | -0.505 | Destabilizing | 0.021 | N | 0.189 | neutral | N | 0.441855097 | None | None | N |
P/C | 0.6 | likely_pathogenic | 0.5607 | ambiguous | -0.533 | Destabilizing | 0.94 | D | 0.296 | neutral | None | None | None | None | N |
P/D | 0.4021 | ambiguous | 0.3828 | ambiguous | -0.532 | Destabilizing | 0.418 | N | 0.274 | neutral | None | None | None | None | N |
P/E | 0.2562 | likely_benign | 0.2438 | benign | -0.664 | Destabilizing | 0.228 | N | 0.26 | neutral | None | None | None | None | N |
P/F | 0.3861 | ambiguous | 0.3614 | ambiguous | -0.844 | Destabilizing | 0.418 | N | 0.38 | neutral | None | None | None | None | N |
P/G | 0.2513 | likely_benign | 0.2338 | benign | -0.621 | Destabilizing | 0.129 | N | 0.238 | neutral | None | None | None | None | N |
P/H | 0.2151 | likely_benign | 0.2098 | benign | -0.265 | Destabilizing | 0.836 | D | 0.282 | neutral | None | None | None | None | N |
P/I | 0.2082 | likely_benign | 0.2052 | benign | -0.353 | Destabilizing | 0.001 | N | 0.181 | neutral | None | None | None | None | N |
P/K | 0.2394 | likely_benign | 0.237 | benign | -0.476 | Destabilizing | 0.129 | N | 0.259 | neutral | None | None | None | None | N |
P/L | 0.0918 | likely_benign | 0.0908 | benign | -0.353 | Destabilizing | 0.001 | N | 0.145 | neutral | N | 0.47771711 | None | None | N |
P/M | 0.2243 | likely_benign | 0.2153 | benign | -0.313 | Destabilizing | 0.716 | D | 0.345 | neutral | None | None | None | None | N |
P/N | 0.2679 | likely_benign | 0.2644 | benign | -0.146 | Destabilizing | 0.264 | N | 0.335 | neutral | None | None | None | None | N |
P/Q | 0.163 | likely_benign | 0.1565 | benign | -0.444 | Destabilizing | 0.351 | N | 0.311 | neutral | N | 0.452818505 | None | None | N |
P/R | 0.1812 | likely_benign | 0.1797 | benign | 0.086 | Stabilizing | 0.351 | N | 0.361 | neutral | N | 0.45587947 | None | None | N |
P/S | 0.1209 | likely_benign | 0.1163 | benign | -0.447 | Destabilizing | 0.001 | N | 0.115 | neutral | N | 0.479450693 | None | None | N |
P/T | 0.0869 | likely_benign | 0.0871 | benign | -0.488 | Destabilizing | 0.003 | N | 0.125 | neutral | N | 0.513120549 | None | None | N |
P/V | 0.1518 | likely_benign | 0.1467 | benign | -0.37 | Destabilizing | 0.001 | N | 0.105 | neutral | None | None | None | None | N |
P/W | 0.5956 | likely_pathogenic | 0.5736 | pathogenic | -0.917 | Destabilizing | 0.983 | D | 0.291 | neutral | None | None | None | None | N |
P/Y | 0.3789 | ambiguous | 0.3616 | ambiguous | -0.614 | Destabilizing | 0.94 | D | 0.399 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.